DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and RPT2a

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_194633.1 Gene:RPT2a / 829025 AraportID:AT4G29040 Length:443 Species:Arabidopsis thaliana


Alignment Length:393 Identity:182/393 - (46%)
Similarity:259/393 - (65%) Gaps:24/393 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RTRLMDNE-IK---IMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEE 93
            :.||:..| ||   :|:.|.:.....::.|.||.:::..|:...:..|..|.|:.||:|      
plant    62 KLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELID------ 120

  Fly    94 EDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYD 158
                     :|.     |::.:|....|::.::..||.::|:||..:.::.....::..|..|.|
plant   121 ---------ENH-----AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVD 171

  Fly   159 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKT 223
            ..|..|:|::.|.|.|:|||||:.||||:.|||.||:||.|.::::||.|||||:|||.||||||
plant   172 PMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKT 236

  Fly   224 LLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE 288
            |||:|.|..|.:|||::.|.:|:|.::|||.||||:.|.:|.:.:|:|:||||:||:||||:|:.
plant   237 LLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAH 301

  Fly   289 KAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 353
            ..|:||:||||||||||||||.|..|:|||.||||::.|||||||.||:|||||||.|:.:.|.|
plant   302 SGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366

  Fly   354 IMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQA 418
            |.|||:.||.:|.|||.||...:.|:|:||..||:|.|||::|||.....|||.||..|..:|..
plant   367 IFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMF 431

  Fly   419 KKK 421
            |||
plant   432 KKK 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 180/391 (46%)
RPT2aNP_194633.1 PTZ00361 7..443 CDD:185575 182/393 (46%)

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