Protein Alignment Rpt5 and Psmc5

DIOPT Version :9

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_112411.1
• Gene: Psmc5 / 81827
• RGDID: 708376
• Length: 406
• Species: Rattus norvegicus
• Alignment Length: 412
• Identity: 181/412 - (43%)
• Similarity: 250/412 - (60%)
• Gaps: 34/412 - (8%)

  Fly    12 EDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQ----NEKIKDNTEKIKVN 72
            |:|:...|.....:|.   :...:|:.|:    ||:.:|   .:|||    |.|::...|::::.
  Rat    12 EEGKAGSGLRQYYLSK---IEELQLIVND----KSQNLR---RLQAQRNELNAKVRLLREELQLL 66

  Fly    73 KTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPG 137
            :.....|..|:..:|                    .|..::|......:.:.|...:|...:.|.
  Rat    67 QEQGSYVGEVVRAMD--------------------KKKVLVKVHPEGKFVVDVDKNIDINDVTPN 111

  Fly   138 DLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFK 202
            ..|.:..|||.:.:.||.:.|..|..|.|::.|...|..||||||||:|:.|.:.||:.|.|.|:
  Rat   112 CRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFE 176

  Fly   203 NLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 267
            .|||..||||||||||||||||||||.|..|..||::::|.:|||.|||:||::||:.|.:|:|.
  Rat   177 ALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREH 241

  Fly   268 APAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALL 332
            ||:|||:||:|:||:.|.:....||.||||||||||||||||.:|.:||||.||||:||||.|||
  Rat   242 APSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALL 306

  Fly   333 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIAL 397
            |.||:|||||||.||||||..|::|||||||::..:|..:::......:||:.|.||.||||.||
  Rat   307 RPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYAL 371

  Fly   398 RRSANSVTHEDFMDAIMEVQAK 419
            |.....||.|||..|:.:|..|
  Rat   372 RERRVHVTQEDFEMAVAKVMQK 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	RPT1	33..421	CDD:224143	177/391 (45%)
Psmc5	NP_112411.1	RPT1	4..404	CDD:224143	181/412 (44%)
		May mediate interaction with PRPF9. /evidence=ECO:0000250|UniProtKB:P62196	186..406		125/208 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920