DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and ftsh4

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_565616.1 Gene:ftsh4 / 817154 AraportID:AT2G26140 Length:717 Species:Arabidopsis thaliana


Alignment Length:456 Identity:142/456 - (31%)
Similarity:219/456 - (48%) Gaps:78/456 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIK--- 63
            |:.:.|:.  |..|.:...|::|.:..|.|         |::.:|:. .:.....|.:|.||   
plant    61 ARRVRDRE--EVNEVAHLRELIRRNDPEAV---------IRMFESQP-SLHANASALSEYIKALV 113

  Fly    64 --DNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRK-GKCAVIKT--------ST 117
              |..::.::.:||...::.|       .:|||..|.:....|..| .|..|:.|        ||
plant   114 KVDRLDQSELVRTLQRGIAGV-------AREEETFGGLGAFRNVGKPTKDGVLGTASAPIHTIST 171

  Fly   118 RQAY---------------FLPVIGLVDAEKLKPGDLV---GVNKDSYLILETLPAEYDARVKAM 164
            .:.:               ||.:.|:        |.|:   |:.|...|..|..|: .|:..|  
plant   172 ERTHFKEQLWSTIRTIGVGFLLISGI--------GALIEDRGIGKGLGLHEEVQPS-MDSSTK-- 225

  Fly   165 EVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARAC 229
                     :||:.|:|:...|| |.:|..:...::|..||...||||||.||||||||:||||.
plant   226 ---------FSDVKGVDEAKAEL-EEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAI 280

  Fly   230 AAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 294
            |.:....|...:|.:..:||:|.||:.|||.|:.||:.:|.||||||:||||..|...::   :.
plant   281 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQ---QY 342

  Fly   295 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHS 359
            ::.|:.::|.:||||.....|.|:||||..:.||.||:|.||.||.|..|:|:.|.|.:|::.|.
plant   343 MKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHM 407

  Fly   360 RKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDF---MDAIMEVQAKKK 421
            .|:..:.||:...::|.|..|:||....:...|.:.|....:..||..|.   .|.||....:|.
plant   408 SKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERKS 472

  Fly   422 A 422
            |
plant   473 A 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 134/427 (31%)
ftsh4NP_565616.1 PRK09862 135..>282 CDD:182120 52/167 (31%)
HflB <224..655 CDD:440233 102/265 (38%)

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