DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt5 and PSMC3

DIOPT Version :9

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_016873515.1 Gene:PSMC3 / 5702 HGNCID:9549 Length:461 Species:Homo sapiens


Alignment Length:392 Identity:332/392 - (84%)
Similarity:367/392 - (93%) Gaps:3/392 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TLEDK--SIWEDGE-ESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDN 65
            |.::|  ::|::.| :.:||||::|||:||:.||||:|:|||||||||:|:|||:||..:|||:|
Human    12 TRQEKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKEN 76

  Fly    66 TEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVD 130
            :||||||||||||||||||||||||.::|:||:...||:|||||||||||||||.||||||||||
Human    77 SEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVD 141

  Fly   131 AEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPM 195
            ||||||||||||||||||||||||.|||:||||||||||||||||||||||||||||:||:||||
Human   142 AEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 206

  Fly   196 THKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 260
            .|||||:||||.||||||:||||||||||||||||||||:|||||||||||||||||||||||||
Human   207 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDA 271

  Fly   261 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVD 325
            |||||||||:|||||||||||||||||||||||||||||||||||||||.....:||||||||||
Human   272 FALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVD 336

  Fly   326 ILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCV 390
            |||||||||||||||||||.||||||||||||||||||||.|||:|||:|.||||||||||||||
Human   337 ILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCV 401

  Fly   391 EA 392
            ||
Human   402 EA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 RPT1 33..421 CDD:224143 319/360 (89%)
PSMC3XP_016873515.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145072
Domainoid 1 1.000 245 1.000 Domainoid score I2191
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2097
Inparanoid 1 1.050 720 1.000 Inparanoid score I636
Isobase 1 0.950 - 0 Normalized mean entropy S159
OMA 1 1.010 - - QHG54009
OrthoDB 1 1.010 - - D298123at33208
OrthoFinder 1 1.000 - - FOG0003626
OrthoInspector 1 1.000 - - oto89421
orthoMCL 1 0.900 - - OOG6_101915
Panther 1 1.100 - - LDO PTHR23073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.820

Return to query results.
Submit another query.