DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and psmc5

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001003740.1 Gene:psmc5 / 445285 ZFINID:ZDB-GENE-030131-6547 Length:406 Species:Danio rerio


Alignment Length:411 Identity:183/411 - (44%)
Similarity:249/411 - (60%) Gaps:31/411 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQ----NEKIKDNTEKIKVNK 73
            |.|:|.|...:|......:...:|..||    ||:.:|   .:|||    |.|::...|::::.:
Zfish    10 DIEDSKGGSGLRQYYLSKIEELQLTVNE----KSQNLR---RLQAQRNELNAKVRLLREELQLLQ 67

  Fly    74 TLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGD 138
            .....|..|:..:|                    .|..::|......:.:.|...:|...:.|..
Zfish    68 EQGSYVGEVVRAMD--------------------KKKVLVKVHPEGKFVVDVDKNIDINDVTPNC 112

  Fly   139 LVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKN 203
            .|.:..|||.:.:.||.:.|..|..|.|::.|...|..||||||||:|:.|.:.||:.|.|.|:.
Zfish   113 RVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEA 177

  Fly   204 LGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 268
            |||..||||||||||||||||||||.|..|..||::::|.:|||.|||:||::||:.|.:|:|.|
Zfish   178 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242

  Fly   269 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLR 333
            |:|||:||:|:||:.|.:....||.||||||||||||||||.:|.:||||.||||:||||.||||
Zfish   243 PSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR 307

  Fly   334 SGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 398
            .||:|||||||.||||||..|::|||||||::..:|..:::......:||:.|.||.||||.|||
Zfish   308 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372

  Fly   399 RSANSVTHEDFMDAIMEVQAK 419
            .....||.|||..|:.:|..|
Zfish   373 ERRVHVTQEDFEMAVAKVMQK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 178/396 (45%)
psmc5NP_001003740.1 PRK03992 24..400 CDD:179699 178/397 (45%)

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