Protein Alignment Rpt5 and Rpt6R

DIOPT Version :10

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_651811.1
• Gene: Rpt6R / 43635
• FlyBaseID: FBgn0039788
• Length: 399
• Species: Drosophila melanogaster
• Alignment Length: 381
• Identity: 173/381 - (45%)
• Similarity: 243/381 - (63%)
• Gaps: 17/381 - (4%)

  Fly    39 NEIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLD 103
            :|::...:|..:....:|||..::     .:||.     |:...::||     :|:......|:.
  Fly    23 SELQFTVNERQKNLLRLQAQRNEL-----NLKVR-----LLREELQLL-----QEQGSYIAEVVK 72

  Fly   104 NQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDE 168
            ...|.| .::|......|.:.|...::.:.:.|...|.:..:||.:.:.||.:.|..|..|.|::
  Fly    73 PMDKNK-VLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEK 136

  Fly   169 RPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 233
            .|...|..:|||||||||:.|.:.||:.|.|.|..|||..||||||||||||||||||||.|..|
  Fly   137 VPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201

  Fly   234 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 298
            :.||::::|.:|||.|||:|:::||:.|.:|:|.||:|||:||:|:||:.|.:: ..||.|||||
  Fly   202 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLET-GTGDSEVQRT 265

  Fly   299 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 363
            |||||||||||.:|.:||||.||||:|:||.||||.||:|||||||.||||||..|::|||||||
  Fly   266 MLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN 330

  Fly   364 VSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAK 419
            ::..:|..:::......:||:.|.||.||||.|||.....||.|||..|:.:|..|
  Fly   331 LTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMK 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	PRK03992	28..421	CDD:179699	173/381 (45%)
Rpt6R	NP_651811.1	PRK03992	21..395	CDD:179699	173/381 (45%)