Protein Alignment Rpt5 and psmc4

DIOPT Version :10

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_956044.2
• Gene: psmc4 / 326884
• ZFINID: ZDB-GENE-030131-5083
• Length: 418
• Species: Danio rerio
• Alignment Length: 384
• Identity: 161/384 - (41%)
• Similarity: 235/384 - (61%)
• Gaps: 31/384 - (8%)

  Fly    55 IQAQNEKIKDN-----------TEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKG 108
            ::.|.|.|||.           .|::|..:::|.::...:|.:|.:
Zfish    54 LEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQN------------------- 99

  Fly   109 KCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQ 173
             .|::.::|...|::.::..:|.|.|||...|.::|.|..:::.||.|.|:.:..:..|::|...
Zfish   100 -TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVL 163

  Fly   174 YSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFL 238
            ||||||:|.|.||:.|||.||:||.|.:|.:||.||:|||:|||||.|||:||:|.|..|.:.|:
Zfish   164 YSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFI 228

  Fly   239 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 303
            ::.|.:.||.::|:|.::|||.|.||||.|||||||||:|||.|||||::...||||||.:||||
Zfish   229 RVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELL 293

  Fly   304 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDV 368
            ||:|||....::|||.||||.|.|||||||.||||||||||.|:...:..:....:.|||:|.:|
Zfish   294 NQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEV 358

  Fly   369 NFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYY 427
            :.|:.....|..:||...::|.||||:|:|.:...|..:||..|...|..|.:....:|
Zfish   359 DLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	PRK03992	28..421	CDD:179699	160/376 (43%)
psmc4	NP_956044.2	PTZ00454	34..418	CDD:240423	161/384 (42%)