Protein Alignment Rpt5 and psmc6

DIOPT Version :10

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001003832.1
• Gene: psmc6 / 321585
• ZFINID: ZDB-GENE-030131-304
• Length: 389
• Species: Danio rerio
• Alignment Length: 385
• Identity: 163/385 - (42%)
• Similarity: 238/385 - (61%)
• Gaps: 15/385 - (3%)

  Fly    57 AQNEK--IKDNTEKIKVNKTLPYLVSNVIE-LLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTR 118
            |:|.:  ::|..:|:..:|.:...:..:.| |.::..|.|:.:..:..|.:..:....|:|..|.
Zfish     2 AENREKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTE 66

  Fly   119 QAYFLP-------VIGL---VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQ 173
            :.:.:.       |:|.   :|..|||||..|.::..:..|:..||.|.|..|..|..::..:..
Zfish    67 EKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVS 131

  Fly   174 YSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFL 238
            ||:||||.:||:||.|.:.||:|:.|.|:.:||.||||.||||||||||||||||.|:|....||
Zfish   132 YSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFL 196

  Fly   239 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 303
            |:....:|..:||:.|:|:|:.|..|::..|.|||:||:||||.:||....:.|||:|||::|||
Zfish   197 KVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELL 261

  Fly   304 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDV 368
            ||:|||.:...:|:|.||||.|.|||||||.|||||||....|||:||..|::|||..:....|:
Zfish   262 NQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDI 326

  Fly   369 NFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKK--ANLNY 426
            ::|.:.:.:|.||||..:.||.||||.|:|.....||.||||.|:.:|...||  :.|:|
Zfish   327 DYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKLESKLDY 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	PRK03992	28..421	CDD:179699	159/376 (42%)
psmc6	NP_001003832.1	PRK03992	4..379	CDD:179699	158/374 (42%)