Protein Alignment Rpt5 and Psmc6

DIOPT Version :9

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001093979.1
• Gene: Psmc6 / 289990
• RGDID: 1308825
• Length: 403
• Species: Rattus norvegicus
• Alignment Length: 382
• Identity: 158/382 - (41%)
• Similarity: 236/382 - (61%)
• Gaps: 13/382 - (3%)

  Fly    58 QNEKIKDNTEKIKVNKTLPYLVSNVIE-LLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAY 121
            :::.::|..:|:..:|.:...:..:.| |.::..|.|:.:..:..|.:..:....|:|..|.:.:
  Rat    19 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKF 83

  Fly   122 FLP-------VIGL---VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSD 176
            .:.       |:|.   :|..|||||..|.::..:..|:..||.|.|..|..|..::.....||:
  Rat    84 IVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSE 148

  Fly   177 IGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 241
            ||||.:||:||.|.:.||:|:.|.|:.:||.||||.||||||||||||||||.|:|....|||:.
  Rat   149 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVV 213

  Fly   242 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 306
            ...:|..:||:.|:|:|:.|..|::..|.|||:||:||||.:||....:.|||:|||::|||||:
  Rat   214 SSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQM 278

  Fly   307 DGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFE 371
            |||.:...:|:|.||||.|.|||||||.|||||||....|||:||..|::||:..:....::::|
  Rat   279 DGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYE 343

  Fly   372 ELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKK--ANLNY 426
            .:.:.:|.||||..:.||.||||.|:|...:.|..||||.|:.:|...||  :.|:|
  Rat   344 AIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	RPT1	33..421	CDD:224143	154/373 (41%)
Psmc6	NP_001093979.1	RPT1	18..401	CDD:224143	158/382 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820