DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and Yme1l1

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_038799.1 Gene:Yme1l1 / 27377 MGIID:1351651 Length:715 Species:Mus musculus


Alignment Length:459 Identity:123/459 - (26%)
Similarity:209/459 - (45%) Gaps:63/459 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDN 65
            |..||...|::....::|......:....:..::|    ..|.:||.    |..:|:.:|::   
Mouse   114 MFSTLRSSSLYRQHPKTLRSICSDLQYFPVFIQSR----GFKTLKSR----TRRLQSTSERL--- 167

  Fly    66 TEKIKVNKTLPYLVSNVI------ELLDVD--------PQEEEDDGSVTVLDNQRKGKCAVIKTS 116
               ::.....|..|...:      :|..:|        |:..:|.......:...|.:....||:
Mouse   168 ---VEAQNIAPSFVKGFLLRDRGTDLESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTN 229

  Fly   117 -----TRQAYF-LPVIGLVDAEKLKPGDLVGVNKDSYLILE-TLPAEYDARVKAMEVDERPTEQY 174
                 ||...| |.:.|           :.|:.|:.:|.:. ......|:.|..:::.....|..
Mouse   230 DSLRRTRLILFVLLLFG-----------IYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHV 283

  Fly   175 SDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 239
            ..:....:::||::|.:..|    :||..||...|||:||.|||||||||||||.|.:....|..
Mouse   284 KGVEEAKQELQEVVEFLKNP----QKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYY 344

  Fly   240 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 304
            .:|.:..:||:|.||..:|:.|..||..||.:|||||||::|.||.:|..  ....::|:.:||.
Mouse   345 ASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--HPYSRQTINQLLA 407

  Fly   305 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVN 369
            ::|||.....:.:|.|||..:.||.||:|.||.|.::..|.|:.:.|..|::.:..|:.....|:
Mouse   408 EMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVD 472

  Fly   370 FEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDF---MDAIM--------EVQAKKKAN 423
            .|.::|.|..|:||:.:.:..:|.:.|.......||.::.   .|.|:        |:..|.|..
Mouse   473 PEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTI 537

  Fly   424 LNYY 427
            ..|:
Mouse   538 TAYH 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 116/424 (27%)
Yme1l1NP_038799.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54
HflB <274..709 CDD:440233 92/274 (34%)
Blue background indicates that the domain is not in the aligned region.

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