Protein Alignment Rpt5 and Psmc2

DIOPT Version :10

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_150239.2
• Gene: Psmc2 / 25581
• RGDID: 3428
• Length: 433
• Species: Rattus norvegicus
• Alignment Length: 441
• Identity: 169/441 - (38%)
• Similarity: 250/441 - (56%)
• Gaps: 48/441 - (10%)

  Fly    18 LGEEVMRMSTDEIVSR-TRLMD-NEIKIMKS--------EVIRITHEIQAQNEKIKDNT------ 66
            ||.:..:...||...: .|.:| .:|.::|:        ::.::..:||...:||.:.|
  Rat     5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESD 69

  Fly    67 -------------EKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTR 118
                         :|..:....|..|:...::::.|.::.:                .:|.....
  Rat    70 TGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPK----------------YIINVKQF 118

  Fly   119 QAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQ 183
            ..:.:.:...|....::.|..|||:::.|.|...||.:.|..|..|:|:|:|...|||:||..:|
  Rat   119 AKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQ 183

  Fly   184 IQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 248
            |::|.|.|..|:.|.|:|.||||.|||||||:|||||||||.|||.|.:|.:.|:::.|.:|||.
  Rat   184 IEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 248

  Fly   249 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 313
            ::|:||::||:.|.:|:.|...:||.||:||||..|||....||.|||||||||:||||||....
  Rat   249 YVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 313

  Fly   314 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTD 378
            :|||:.||||.|.|||||:|.|||||||||..|:.|.|..|.:||:|.|:|..|:.||.|:|...
  Rat   314 NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCP 378

  Fly   379 DFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEV---QAKKKANLNY 426
            :..||:.::||.||||.|:|......|.:||::|:.:|   .||..|...|
  Rat   379 NSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	PRK03992	28..421	CDD:179699	165/424 (39%)
Psmc2	NP_150239.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..22		4/16 (25%)
		PRK03992	44..430	CDD:179699	161/402 (40%)