DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and Psmc2

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_035318.2 Gene:Psmc2 / 19181 MGIID:109555 Length:433 Species:Mus musculus


Alignment Length:421 Identity:164/421 - (38%)
Similarity:242/421 - (57%) Gaps:46/421 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LMDNEIKIMKS--------EVIRITHEIQAQNEKIKDNT-------------------EKIKVNK 73
            |.:.:|.::|:        ::.::..:||...:||.:.|                   :|..:..
Mouse    25 LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQS 89

  Fly    74 TLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGD 138
            ..|..|:...::::.|.::.:                .:|.......:.:.:...|....::.|.
Mouse    90 EQPLQVARCTKIINADSEDPK----------------YIINVKQFAKFVVDLSDQVAPTDIEEGM 138

  Fly   139 LVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKN 203
            .|||:::.|.|...||.:.|..|..|:|:|:|...|||:||..:||::|.|.|..|:.|.|:|.|
Mouse   139 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVN 203

  Fly   204 LGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 268
            |||.|||||||:|||||||||.|||.|.:|.:.|:::.|.:|||.::|:||::||:.|.:|:.|.
Mouse   204 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 268

  Fly   269 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLR 333
            ..:||.||:||||..|||....||.|||||||||:||||||....:|||:.||||.|.|||||:|
Mouse   269 ACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMR 333

  Fly   334 SGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 398
            .|||||||||..|:.|.|..|.:||:|.|:|..|:.||.|:|...:..||:.::||.||||.|:|
Mouse   334 PGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398

  Fly   399 RSANSVTHEDFMDAIMEV---QAKKKANLNY 426
            ......|.:||::|:.:|   .||..|...|
Mouse   399 ARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 162/414 (39%)
Psmc2NP_035318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PRK03992 44..430 CDD:179699 161/402 (40%)
Blue background indicates that the domain is not in the aligned region.

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