Protein Alignment Rpt5 and rpt-1

DIOPT Version :9

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_506005.1
• Gene: rpt-1 / 179641
• WormBaseID: WBGene00004501
• Length: 435
• Species: Caenorhabditis elegans
• Alignment Length: 445
• Identity: 180/445 - (40%)
• Similarity: 261/445 - (58%)
• Gaps: 50/445 - (11%)

  Fly    16 ESLGEEVMRMSTDEIVSRTR----LMDNEIKIMKSEVIRITHEIQAQNEKIKD----NTEKIKVN 72
            :.||:::.:...|:.....:    |.:.:|.::|    |......|:..|..|    |..| |||
 Worm     3 DHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLK----RYGQGPYAEQLKTLDADIENCLK-KVN 62

  Fly    73 KTLPYLVSNVIE---------LLDV--DPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQ--AYFLP 124
            :     :|.|.|         |.|:  |.|..:.:..:.|      .:|..|.||.:.  .|.:.
 Worm    63 E-----LSGVKESDTGLAPPALWDIAADKQAMQQEQPLQV------ARCTKIITSDKHDPRYLIN 116

  Fly   125 VIG----LVD-AEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 179
            |..    :|| |:.:.|.|:     |||:::.|.|...|||:.|..|..|:|:|:|...|||:||
 Worm   117 VKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGG 181

  Fly   180 LDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 244
            ...||::|.|.|..|:.|.|::.||||.|||||||||||||||||.|||.|.:|.:.|:::.|.:
 Worm   182 CKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSE 246

  Fly   245 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF 309
            |||.::|:||::||:.|.:|:.|...:||.||:||:|..|||..:.||.|||||||||:||||||
 Worm   247 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGF 311

  Fly   310 SSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELS 374
            ....:|||:.||||.|.|||||:|.||||||:||..|:...||.|::||:::|:|..|:.::.|:
 Worm   312 DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLA 376

  Fly   375 RSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEV---QAKKKANLNY 426
            |...:..||:.::||.||||.|:|......|.:||::||.:|   .||..|...|
 Worm   377 RLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRY 431

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	RPT1	33..421	CDD:224143	175/421 (42%)
rpt-1	NP_506005.1	RPT1	29..432	CDD:224143	176/419 (42%)
		AAA	214..345	CDD:278434	78/130 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920