DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and rpt-1

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_506005.1 Gene:rpt-1 / 179641 WormBaseID:WBGene00004501 Length:435 Species:Caenorhabditis elegans


Alignment Length:445 Identity:180/445 - (40%)
Similarity:261/445 - (58%) Gaps:50/445 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ESLGEEVMRMSTDEIVSRTR----LMDNEIKIMKSEVIRITHEIQAQNEKIKD----NTEKIKVN 72
            :.||:::.:...|:.....:    |.:.:|.::|    |......|:..|..|    |..| |||
 Worm     3 DHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLK----RYGQGPYAEQLKTLDADIENCLK-KVN 62

  Fly    73 KTLPYLVSNVIE---------LLDV--DPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQ--AYFLP 124
            :     :|.|.|         |.|:  |.|..:.:..:.|      .:|..|.||.:.  .|.:.
 Worm    63 E-----LSGVKESDTGLAPPALWDIAADKQAMQQEQPLQV------ARCTKIITSDKHDPRYLIN 116

  Fly   125 VIG----LVD-AEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGG 179
            |..    :|| |:.:.|.|:     |||:::.|.|...|||:.|..|..|:|:|:|...|||:||
 Worm   117 VKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGG 181

  Fly   180 LDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 244
            ...||::|.|.|..|:.|.|::.||||.|||||||||||||||||.|||.|.:|.:.|:::.|.:
 Worm   182 CKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSE 246

  Fly   245 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF 309
            |||.::|:||::||:.|.:|:.|...:||.||:||:|..|||..:.||.|||||||||:||||||
 Worm   247 LVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGF 311

  Fly   310 SSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELS 374
            ....:|||:.||||.|.|||||:|.||||||:||..|:...||.|::||:::|:|..|:.::.|:
 Worm   312 DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLA 376

  Fly   375 RSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEV---QAKKKANLNY 426
            |...:..||:.::||.||||.|:|......|.:||::||.:|   .||..|...|
 Worm   377 RLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRY 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 176/426 (41%)
rpt-1NP_506005.1 PRK03992 117..420 CDD:179699 148/302 (49%)

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