DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and rpt-2

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_504558.1 Gene:rpt-2 / 178988 WormBaseID:WBGene00004502 Length:443 Species:Caenorhabditis elegans


Alignment Length:393 Identity:175/393 - (44%)
Similarity:262/393 - (66%) Gaps:24/393 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RTRLMDNE-IK---IMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEE 93
            |.:|:.:| ||   :|:.|.|:....::.|.|:.::...|:...:..|..|.::.|         
 Worm    62 RLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEE--------- 117

  Fly    94 EDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYD 158
                   ::|:|.    |::.|:....:::.::..||.|:|:||..|.:|..::.::..|..:.|
 Worm   118 -------IIDDQH----AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTD 171

  Fly   159 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKT 223
            ..|..|::::.|.|.|:|:||||:||||:.|||.||:||.|.::.:||.|||||:|||.||||||
 Worm   172 PMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKT 236

  Fly   224 LLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE 288
            |||:|.|.||.:|||::.|.:|:|.::|||.|:||:.|.:|:|.||:|:||||:||:||||:||.
 Worm   237 LLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSN 301

  Fly   289 KAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 353
            ..|:||:||||||||||||||.|..|:||:.||||::.|||||:|.||:|||||||.|:|:.:.|
 Worm   302 SGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRR 366

  Fly   354 IMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQA 418
            |.|||:.:|.:..:||.||...:.|:.:||..||:|.|||::|||.....||.|||..:...|..
 Worm   367 IFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLY 431

  Fly   419 KKK 421
            :||
 Worm   432 RKK 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 173/391 (44%)
rpt-2NP_504558.1 PTZ00361 1..443 CDD:185575 175/393 (45%)

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