Protein Alignment Rpt5 and ppgn-1

DIOPT Version :10

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_500191.3
• Gene: ppgn-1 / 177021
• WormBaseID: WBGene00021425
• Length: 747
• Species: Caenorhabditis elegans
• Alignment Length: 297
• Identity: 97/297 - (32%)
• Similarity: 156/297 - (52%)
• Gaps: 27/297 - (9%)

  Fly   142 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK---QIQELIEAVVLPMTHKEKFKN 203
            :.|..:.|::....|...::|.         ::.|:.|..:   :|:|.::.:..|    .:|..
 Worm   261 MTKGKFTIIDPHSVEGKKQLKI---------KFKDVAGCSEAKVEIREFVDYLKNP----GRFTK 312

  Fly   204 LGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 268
            ||...|:|.||.||||.||||||:|.||::...|:.:.|.:.|::..|.||..:|..|..|:.:|
 Worm   313 LGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRA 377

  Fly   269 PAIIFIDELDAIGTKRFDSEKA------GDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDIL 327
            |.||:|||:||||.||.:...|      |..|.::|:.:||.::||..|...:.|:|:|||.|:|
 Worm   378 PCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVL 442

  Fly   328 DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSN--DVNFEELSRSTDDFNGAQCKAVCV 390
            |.||||.||.||.|....|....|..:.:::.||:.:.:  ....:.|:..|..|.||....||.
 Worm   443 DKALLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCN 507

  Fly   391 EAGMIALRRSANSVTHEDF---MDAIMEVQAKKKANL 424
            |:.:.|.....:.|||:|.   :|.::....|:..:|
 Worm   508 ESAIRAASNKCHVVTHKDMEYALDRVLAGSEKRSRSL 544

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	PRK03992	28..421	CDD:179699	96/292 (33%)
ppgn-1	NP_500191.3	FtsH_ext	111..212	CDD:377663
		HflB	<277..725	CDD:440233	94/281 (33%)