DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and rpt-3

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_498429.1 Gene:rpt-3 / 175925 WormBaseID:WBGene00004503 Length:414 Species:Caenorhabditis elegans


Alignment Length:405 Identity:163/405 - (40%)
Similarity:253/405 - (62%) Gaps:25/405 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 MSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQN--EKIKDNTEKIKVNKTLPYLVSNVIELLD 87
            :|:|:.:..|.|   |.::...:|:....:::.:|  :::....|::|..:::|.::...:|.:|
 Worm    32 VSSDDYIKLTTL---ERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVD 93

  Fly    88 VDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 152
            .:.                    |::.::|...|::.|:.::|.|.||||..|.::|.|..:::.
 Worm    94 QNH--------------------AIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDV 138

  Fly   153 LPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGP 217
            ||.|.|:.::.:..||:|...|.||||||.|.||:.|||.||:||.|.::.:||.||:|||:|||
 Worm   139 LPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGP 203

  Fly   218 PGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGT 282
            ||.|||:||:|.||.|.::|:::.|.:.||.::|:|.::|||.|.||||.:|:||||||:|||.|
 Worm   204 PGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIAT 268

  Fly   283 KRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPN 347
            ||||::...||||||.:||||||:|||..:.::|||.||||.|.|||||||.||||||||||.|:
 Worm   269 KRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPD 333

  Fly   348 EEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDA 412
            ...:..:......:||:|:||:.|:.....|..:||...::|.||||.|:|.:...|..:|...|
 Worm   334 RRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKA 398

  Fly   413 IMEVQAKKKANLNYY 427
            ...|..|...:..:|
 Worm   399 YKNVVKKDTNDFEFY 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 161/394 (41%)
rpt-3NP_498429.1 PTZ00454 35..414 CDD:240423 162/402 (40%)

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