DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and C10G11.8

DIOPT Version :9

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001379656.1 Gene:C10G11.8 / 172324 WormBaseID:WBGene00015688 Length:438 Species:Caenorhabditis elegans


Alignment Length:404 Identity:166/404 - (41%)
Similarity:241/404 - (59%) Gaps:45/404 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IKIMKSEVIRITHEIQAQNEKIKDNTEK----IKVNKT-----------LPYLVSNVIELLDVDP 90
            ::::|..  ||...:|.:.|.|...|.:    :.|.|.           .|..::.|.||.|   
 Worm    48 VRLLKMN--RIHDYLQLEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFD--- 107

  Fly    91 QEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPA 155
               ::..:|.|::            .:|:.:::|::.:||.:.|:...||.|....  :.:|:|:
 Worm   108 ---DEKHAVVVVE------------GSRREWYVPILSIVDKDLLRLNALVMVKAGG--MFKTVPS 155

  Fly   156 --------EYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGV 212
                    :.|:.....:|::.|.|.:.||||.:.|||||.|:|.||:||.|.::.:||..||||
 Worm   156 AIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGV 220

  Fly   213 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDEL 277
            :|||.|||||||||:|.|..|.:||::..|..|||...|:||:|||..|.:|||:||:|:||||:
 Worm   221 ILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEI 285

  Fly   278 DAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIE 342
            ||:||||||:...|::|||||:||||||||||.|..|:|:|.||||:|.|||||:|.||:|||||
 Worm   286 DAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIE 350

  Fly   343 FPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHE 407
            .|.|:|:.|.:|..||:..|.:...|.:|.:.......:||:.||||.||||:|||.....|..:
 Worm   351 LPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTD 415

  Fly   408 DFMDAIMEVQAKKK 421
            ||..|:..|...||
 Worm   416 DFEKAVKSVMLSKK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 RPT1 33..421 CDD:224143 164/402 (41%)
C10G11.8NP_001379656.1 PTZ00361 9..437 CDD:185575 166/404 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D298123at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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