DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt5 and Rpt4

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_321726.5 Gene:Rpt4 / 1281769 VectorBaseID:AGAMI1_012379 Length:392 Species:Anopheles gambiae


Alignment Length:397 Identity:160/397 - (40%)
Similarity:236/397 - (59%) Gaps:26/397 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RTRLMDN-EIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDD 96
            |.:|::: |::....||.....|:..|.:|.:::   :|..:::..:|..|::.|..|.      
Mosquito    16 RKKLLEHKEVESRLKEVRETLKELTKQFDKSEND---LKALQSVGQIVGEVLKQLTEDK------ 71

  Fly    97 GSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARV 161
                          .::|.:....|.:.....:|..|||.|..|.::..:..|:..||.|.|..|
Mosquito    72 --------------FIVKATNGPRYVVGCRRQLDKTKLKSGTRVALDMTTLTIMRYLPREVDPLV 122

  Fly   162 KAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLA 226
            ..|..::.....||.||||.:||:||.|.:.||:.:.|.|..:||.||||.||||||||||||||
Mosquito   123 YNMSHEDPGEVTYSAIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLA 187

  Fly   227 RACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAG 291
            ||.|:|..:.|||:....:|..:||:.|:|:|:.|..|::..|.|||:||:||||.:||....:.
Mosquito   188 RAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 252

  Fly   292 DREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ 356
            |||:|||::|||||:|||.|...:|:|.||||.|.|||||||.||||||||.|.|||:||..|::
Mosquito   253 DREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILK 317

  Fly   357 IHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAKKK 421
            ||:..:....|:::|.:.:.:|:||||..:.||.|||:.|:|.....|..||||.|:.:|...|:
Mosquito   318 IHAAPIAKHGDIDYEAVVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQEDFMKAVRKVADNKR 382

  Fly   422 --ANLNY 426
              :.|:|
Mosquito   383 LESKLDY 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 157/388 (40%)
Rpt4XP_321726.5 PRK03992 7..381 CDD:179699 157/387 (41%)

Return to query results.
Submit another query.