DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt5 and YME1L

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_061509678.1 Gene:YME1L / 1279395 VectorBaseID:AGAMI1_003770 Length:764 Species:Anopheles gambiae


Alignment Length:265 Identity:107/265 - (40%)
Similarity:158/265 - (59%) Gaps:9/265 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 MEVD-ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLAR 227
            :||| |..|..:.|:.|.|:..|||.|.|.. :.:..||.|||...||||||.||||||||||||
Mosquito   311 VEVDPEDITVTFEDVKGCDEAKQELKEVVEF-LKNPGKFSNLGGKLPKGVLLVGPPGTGKTLLAR 374

  Fly   228 ACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGD 292
            |.|.:....|...|||:..::.:|.||:.|||.|..|||:||.:|||||:|::|.||.:|  ...
Mosquito   375 AVAGEAGVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKERAPCVIFIDEIDSVGAKRTNS--VLH 437

  Fly   293 REVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQI 357
            ....:|:.:||:::|||.....:.|:.||||.|.||.||||.||.|.::..|.|:...|..|:..
Mosquito   438 PYANQTINQLLSEMDGFQQNEGVIVLGATNRRDDLDQALLRPGRFDVEVVVPTPDFTGRKEILTY 502

  Fly   358 HSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVT--H-EDFMDAIMEVQAK 419
            :..|: :|.::|.::|:|.|..|.||..:.:..:|.:.|....|.:|:  | |:..|.:: :..:
Mosquito   503 YLGKI-LSREINIDQLARGTTGFTGADIENMVNQAALRAAIDGAETVSMKHLENARDKVL-MGPE 565

  Fly   420 KKANL 424
            :|:.|
Mosquito   566 RKSRL 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 105/260 (40%)
YME1LXP_061509678.1 None

Return to query results.
Submit another query.