DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and Rpt1

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_309476.3 Gene:Rpt1 / 1270756 VectorBaseID:AGAMI1_001458 Length:434 Species:Anopheles gambiae


Alignment Length:443 Identity:177/443 - (39%)
Similarity:259/443 - (58%) Gaps:47/443 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ESLGEEVMRMSTD--EIVSRTRLMDN-EIKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPY 77
            :.||:::.::..|  |:......:|. :|:::|      |:.....::.||      ::::.:..
Mosquito     3 DHLGDDMRKVKADNKEVEPEIEALDEVDIELLK------TYGQGQYHKSIK------QIDEDIQK 55

  Fly    78 LVSNVIELLDVDPQEEEDDG-----------SVTVLDNQRK---GKCAVI--KTSTRQAYFLPVI 126
            .:..|.||..:   :|.|.|           ...:|.|::.   .:|..|  ..|....|.:.|.
Mosquito    56 AMKQVNELTGI---KESDTGLAPPALWDLASDKQILQNEQPLQVARCTKIINADSDDPKYIINVK 117

  Fly   127 G----LVD-AEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLD 181
            .    :|| |:.:.|.|:     |||:::.|.|...||.:.|..|..|:|:|:|...|||:||..
Mosquito   118 QFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 182

  Fly   182 KQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 246
            :||::|.|.|..|:.|.|||.||||.|||||||:|||||||||.|||.|.:|.:.|:::.|.:||
Mosquito   183 EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELV 247

  Fly   247 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSS 311
            |.::|:||::||:.|.:|:.|...:||.||:||||..|||....||.|||||||||:||||||..
Mosquito   248 QKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDP 312

  Fly   312 TADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRS 376
            ..:|||:.||||.|.|||||:|.||||||:||..|:.|.|..|.:||:|.|:|..|:.||.|:|.
Mosquito   313 RGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARL 377

  Fly   377 TDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEV---QAKKKANLNY 426
            ..:..||:.::||.||||.|:|......|.:||::|:.:|   .||..|...|
Mosquito   378 CPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRY 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 173/424 (41%)
Rpt1XP_309476.3 None

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