DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt5 and Rpt6

DIOPT Version :10

Sequence 1:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_061499158.1 Gene:Rpt6 / 1269903 VectorBaseID:AGAMI1_011589 Length:412 Species:Anopheles gambiae


Alignment Length:384 Identity:172/384 - (44%)
Similarity:243/384 - (63%) Gaps:24/384 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EIKIMKSEVIRITHEIQAQ----NEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVT 100
            |::::.:|..:....:|||    |.|::...|::::.:.....|..|::.:|             
Mosquito    36 ELQLIVAEKNQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMD------------- 87

  Fly   101 VLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAME 165
                   .|..::|......:.:.:...:|...:.|...|.:..:||.:.:.||.:.|..|..|.
Mosquito    88 -------KKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMM 145

  Fly   166 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACA 230
            |::.|...|..:|||||||:|:.|.:.||:.|.|.|..|||..||||||||||||||||||||.|
Mosquito   146 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 210

  Fly   231 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 295
            ..|:.||::::|.:|||.|||:|:::||:.|.:|:|.||:|||:||:|:||:.|.:|...||.||
Mosquito   211 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEV 275

  Fly   296 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 360
            ||||||||||||||.:|.:||||.||||:|||||||||.||:|||||||.||||||..|::||||
Mosquito   276 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSR 340

  Fly   361 KMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQAK 419
            |||::..:|..:::......:||:.|.||.||||.|||.....||.|||..|:.:|..|
Mosquito   341 KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 172/384 (45%)
Rpt6XP_061499158.1 None

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