Protein Alignment Rpt5 and Psmc4

DIOPT Version :9

• Sequence 1: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_476463.1
• Gene: Psmc4 / 117262
• RGDID: 621102
• Length: 418
• Species: Rattus norvegicus
• Alignment Length: 427
• Identity: 167/427 - (39%)
• Similarity: 251/427 - (58%)
• Gaps: 44/427 - (10%)

  Fly    12 EDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDN----------- 65
            :.|...||.|...:  :::.||.:.:..|::.           ::.|.|.|||.
  Rat    24 QTGLSFLGPEPEDL--EDLYSRYKKLQQELEF-----------LEVQEEYIKDEQKNLKKEFLHA 75

  Fly    66 TEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVD 130
            .|::|..:::|.::...:|.:|.:                    .|::.::|...|::.::..:|
  Rat    76 QEEVKRIQSIPLVIGQFLEAVDQN--------------------TAIVGSTTGSNYYVRILSTID 120

  Fly   131 AEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPM 195
            .|.|||...|.::|.|..:::.||.|.|:.:..:..|::|...|:||||:|.|.||:.|||.||:
  Rat   121 RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPL 185

  Fly   196 THKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 260
            ||.|.:|.:||.||:|||:|||||.|||:||:|.|..|.:.|:::.|.:.||.::|:|.::|||.
  Rat   186 THFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDV 250

  Fly   261 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVD 325
            |.||||.|||||||||:|||.|||||::...||||||.:||||||:|||....::|||.||||.|
  Rat   251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

  Fly   326 ILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCV 390
            .|||||||.||||||||||.|:...:..|....:.|||:|.:|:.|:.....|..:||...::|.
  Rat   316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQ 380

  Fly   391 EAGMIALRRSANSVTHEDFMDAIMEVQAKKKANLNYY 427
            |:||:|:|.:...|..:||..|...|..|.:....:|
  Rat   381 ESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt5	NP_524464.1	RPT1	33..421	CDD:224143	161/398 (40%)
Psmc4	NP_476463.1	PTZ00454	34..418	CDD:240423	163/417 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1222
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820