Protein Alignment RanBP3 and NUP2

DIOPT Version :10

• Sequence 1: NP_651178.1
• Gene: RanBP3 / 42804
• FlyBaseID: FBgn0039110
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_013439.1
• Gene: NUP2 / 851048
• SGDID: S000004327
• Length: 720
• Species: Saccharomyces cerevisiae
• Alignment Length: 326
• Identity: 78/326 - (23%)
• Similarity: 129/326 - (39%)
• Gaps: 60/326 - (18%)

  Fly     2 SENNEASVETNCFRGGFTLKASRLGGAVLRPAVLANSSGSNNSSTSPSAGEDSALLNNPFLRESK 66
            |..||.|.....|            ||....|..|:....||:...||:.....|::|....:.|
Yeast   376 SSKNETSKPVFSF------------GAATPSAKEASQEDDNNNVEKPSSKPAFNLISNAGTEKEK 428

  Fly    67 DDDDDEEV-----VATGSAAAESTGDKED-----DDVDERPDPLTKLRSNGIERSSMFAAAKNNM 121
            :...|.:.     ::.||.:.:|  ||..     |..:::.:......|.||..::...|
Yeast   429 ESKKDSKPAFSFGISNGSESKDS--DKPSLPSAVDGENDKKEATKPAFSFGINTNTTKTA----- 486

  Fly   122 PNVQSSGFVFGQNVHERVVAPNAEQV-------TAEPDADTAAS--SVSAQEAASSSTAATSS-- 175
             :.::..|.||.:    .:|.|.|.|       |::|:...:.|  ..:|...|:|||:...|
Yeast   487 -DTKAPTFTFGSS----ALADNKEDVKKPFSFGTSQPNNTPSFSFGKTTANLPANSSTSPAPSIP 546

  Fly   176 SAPLLFSSVIQNAAQTTETSEAAASSSICSSSSNNKESAEAKSLTDVAREYEESRAQKRKYEEVE 240
            |....||...:.....|.|:::...|   ::.:...||.:|   |.|....|||:       .:.
Yeast   547 STGFKFSLPFEQKGSQTTTNDSKEES---TTEATGNESQDA---TKVDATPEESK-------PIN 598

  Fly   241 TFTGEEDEINIIDVSCKLFAF--LNSNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNLRLLLNTK 303
            ...|||||:.:.....||..|  ...:::.||.|.::|...||.....|::.|:.|...:|||..
Yeast   599 LQNGEEDEVALFSQKAKLMTFNAETKSYDSRGVGEMKLLKKKDDPSKVRLLCRSDGMGNVLLNAT 663

  Fly   304 V 304
            |
Yeast   664 V 664

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RanBP3	NP_651178.1	RanBD_RanBP3	243..352	CDD:270001	21/64 (33%)
NUP2	NP_013439.1	NUP50	2..71	CDD:462629
		PRK08581	233..>486	CDD:236304	26/123 (21%)
		RanBD	588..715	CDD:197549	24/84 (29%)