DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBP3 and RANBP3

DIOPT Version :9

Sequence 1:NP_651178.1 Gene:RanBP3 / 42804 FlyBaseID:FBgn0039110 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_015561.1 Gene:RANBP3 / 8498 HGNCID:9850 Length:567 Species:Homo sapiens


Alignment Length:478 Identity:153/478 - (32%)
Similarity:214/478 - (44%) Gaps:120/478 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SENNEASVETNCFRGGFTLKASRL--GGA----------------VLRPAVL-----------AN 37
            |::.|.|       .||.||...|  |.|                |||||||           ..
Human   133 SQSEERS-------SGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKALSQTVP 190

  Fly    38 SSGSNNSS-------TSPSAGEDSALLNNPFLRESKDD----DDDEEVVATGSAAAESTGDKEDD 91
            |||:|..|       ..|:|..|:|...:|  .|:.|:    ::.|......|.|:|       :
Human   191 SSGTNGVSLPADCTGAVPAASPDTAAWRSP--SEAADEVCALEEKEPQKNESSNASE-------E 246

  Fly    92 DVDERPDPLTKLRSNGIERSSMFAAAKNNMPNVQSSGFVFGQNVHERVVAPNAEQVTAE------ 150
            :..|:.||.|:                        ..||||||:.:||...|.....|:      
Human   247 EACEKKDPATQ------------------------QAFVFGQNLRDRVKLINESVDEADMENAGH 287

  Fly   151 PDADT-AASSVSAQEAAS----SSTAATSSSAPLLF----SSVIQNAAQTTETS------EAAAS 200
            |.||| .|::...|..:|    |:.:|.:||...:|    |..:.:..:..|.|      .|||.
Human   288 PSADTPTATNYFLQYISSSLENSTNSADASSNKFVFGQNMSERVLSPPKLNEVSSDANRENAAAE 352

  Fly   201 SSICSSSSNNKESAEAKSLTDVAREYEESRAQKRKYEEVETFTGEEDEINIIDVSCKLFAF--LN 263
            |.  |.||:.:.:.|.:||.:.|..|.::.|:|...|:||..||||.|.|::.:.||||.|  .:
Human   353 SG--SESSSQEATPEKESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTS 415

  Fly   264 SNWEERGRGSLRLND---AKDLRGDSRVVFRTSGNLRLLLNTKVWAAMVAERASQKSLRLTAIDN 325
            .:|.|||||.|||||   ..|....||:|.||.|:|||:||||:||.|..::||:||:|:||:|.
Human   416 QSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDT 480

  Fly   326 SGV-VKIFLAMGRPADIAQLHKALSERI--AKRKVSHPEECSVEEAKNGVASEAAASLQPESTTH 387
            ... ||:||......|..||:.||..||  .:.:|...:|..:...:.|.|         .|...
Human   481 EDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEAKMPAPEPGAA---------PSNEE 536

  Fly   388 DDEDEDAAPGPSGAISAEADSYG 410
            ||.|:|....||||.:|.|...|
Human   537 DDSDDDDVLAPSGATAAGAGDEG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBP3NP_651178.1 RanBD_RanBP3 243..352 CDD:270001 56/114 (49%)
RANBP3NP_015561.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..263 39/169 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..373 12/42 (29%)
RanBD_RanBP3 393..508 CDD:270001 56/114 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..567 16/54 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9167
eggNOG 1 0.900 - - E1_KOG0866
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 165 1.000 Inparanoid score I4189
Isobase 1 0.950 - 0 Normalized mean entropy S3988
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001968
OrthoInspector 1 1.000 - - otm41572
orthoMCL 1 0.900 - - OOG6_107245
Panther 1 1.100 - - LDO PTHR23138
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3882
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.800

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