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Protein Alignment RanBP3 and AT3G15970

DIOPT Version :10

Sequence 1:	NP_651178.1	Gene:	RanBP3 / 42804	FlyBaseID:	FBgn0039110	Length:	449	Species:	Drosophila melanogaster
Sequence 2:	NP_566532.1	Gene:	AT3G15970 / 820841	AraportID:	AT3G15970	Length:	465	Species:	Arabidopsis thaliana

Alignment Length:	409	Identity:	94/409 - (22%)
Similarity:	155/409 - (37%)	Gaps:	64/409 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    27 GAVLRPAVLANSSGSNNSSTSP-SAGEDSALLNNPFLRESKDDDDDEE----VVATGSAAAESTG 86
            |..|.|......|.:...:|.| |||:...|.:.......:.|.|.:|    :.|.|.  .|:.|
plant    76 GIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKETDGDSKEKSDAIDAVGK--QETQG 138

  Fly    87 D----KEDDDVD----ERPDPLTKLRSNG--------IERSSMFAAA---------KNNMPNVQS 126
            |    |..|.:|    |..:.:..:...|        |:.:.:...|         .||...|:.
plant   139 DEISAKTKDIIDGGEKEMSEAVNSVEGGGAVNKNEDEIKTTMVTEVAAGEETVKDDNNNSNTVEG 203

  Fly   127 SGFVF---GQNVHERVVAPNAEQVTAEPDADTAASSVSAQEAASSST----AATSSSAPLLFSSV 184
            |..|.   |.|..|:...........|.:.|:.|.|...|.::|.:.    |:|..||......:
plant   204 SDCVVKDTGGNQTEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGL 268

  Fly   185 IQNAAQTTETSEAAASSSICSSSSNNKESA--EAKSLTDVAREYEESRAQKRKYEEVETFTGEED 247
            :.....|...||   .||.....:||..|:  .|...|.:..:..|:.......::|...||||:
plant   269 VPQEGSTGSGSE---QSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEEN 330

  Fly   248 EINIIDVSCKLFAFLNSNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNLRLLLNTKVWAAMVAER 312
            |.........:|.:|...|:|||:|.|::|.:......:|:|.|:.||.||.||..::..|...:
plant   331 EKAAFTADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAK 395

  Fly   313 ASQKSLRLTAIDN-----SGVVKIFLAMGRPADIAQLHKALSERIAKRKVSHPEECSVEEAKNGV 372
            ..:|.:....:::     .|:..:.|....|..:.:....:.|.              :::|..|
plant   396 MDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEH--------------KDSKPSV 446

  Fly   373 ASEAAASLQPESTTHDDED 391
            | ||||.|:....:...||
plant   447 A-EAAAPLKTPENSPSAED 464

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.