DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBP3 and Ranbp3

DIOPT Version :9

Sequence 1:NP_651178.1 Gene:RanBP3 / 42804 FlyBaseID:FBgn0039110 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_006525007.1 Gene:Ranbp3 / 71810 MGIID:1919060 Length:611 Species:Mus musculus


Alignment Length:447 Identity:141/447 - (31%)
Similarity:201/447 - (44%) Gaps:78/447 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GFTLKASRL--GGA----------------VLRPAVLANSSGSNNSSTSPSAGEDSALLNNPFLR 63
            ||.||...|  |.|                |||||||........|.|.||:|.:..        
Mouse   188 GFRLKPPTLIHGQAPSAGLPSQKPREQQRGVLRPAVLQAPQPKVLSQTVPSSGTNGV-------- 244

  Fly    64 ESKDDDDDEEVVATGSAAAESTGDKEDDDVDERPDPLTKLRSNGIERSSMFAAAKNNMPNVQSS- 127
             |...|      .||.|.:.|..:.......|..:....|.....:::....:.:.:....|:: 
Mouse   245 -SMPAD------CTGPATSVSPENLTQRSPSESAEETHTLEEKVPQKTPHGTSEEGHCEEEQAAP 302

  Fly   128 -GFVFGQNVHERVVAPNAEQVTAE------PDADT-AASSVSAQEAASSSTAATSS---SAPLLF 181
             .||||||:.:||...|.....|:      |.::| :|::...|..:||:..||.|   |...:|
Mouse   303 QAFVFGQNLRDRVKLMNENASVADVDSAAHPSSETPSATNYFLQYISSSADNATHSADNSTKFVF 367

  Fly   182 SSVIQNAAQ-----------TTETSEAAASSSICSSSSNNKESAEAKSLTDVAREYEESRAQKRK 235
            .   ||.::           .::||.....:...|.||:.:.:.:.:||.:.|..|.::.|....
Mouse   368 G---QNMSERVLSPPKLNEANSDTSRETTHAQSGSESSSQEAAPKKESLAESAAAYTKATAWTCL 429

  Fly   236 YEEVETFTGEEDEINIIDVSCKLFAF--LNSNWEERGRGSLRLND---AKDLRGDSRVVFRTSGN 295
            .|:||..||||.|.|::.:.||||.|  .:.:|.|||||.|||||   ..|....||:|.||.|:
Mouse   430 LEKVEVITGEEAESNVLQIQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGS 494

  Fly   296 LRLLLNTKVWAAMVAERASQKSLRLTAID--NSGVVKIFLAMGRPADIAQLHKALSERIAKRKVS 358
            |||:||||:||.|..::||:||:|:||.|  :.| ||:||......|..||:.||..||...:..
Mouse   495 LRLILNTKLWAQMQMDKASEKSIRITATDAEDQG-VKVFLISASSKDTGQLYAALHHRILALRSR 558

  Fly   359 HPEECSVEEAKNGVASEAAASLQPESTTHDDEDEDAAPGPSGAISA----EADSYGP 411
            ..:|   :|||.......|.    .:|..:|.||||...|||...|    |.|...|
Mouse   559 AEQE---QEAKAPPPEPGAT----RATEEEDSDEDAVLAPSGVTGAGTGDEGDGQAP 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBP3NP_651178.1 RanBD_RanBP3 243..352 CDD:270001 57/115 (50%)
Ranbp3XP_006525007.1 RanBD_RanBP3 437..552 CDD:270001 57/115 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9122
eggNOG 1 0.900 - - E1_KOG0866
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 152 1.000 Inparanoid score I4333
Isobase 1 0.950 - 0 Normalized mean entropy S3988
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001968
OrthoInspector 1 1.000 - - otm43621
orthoMCL 1 0.900 - - OOG6_107245
Panther 1 1.100 - - LDO PTHR23138
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3882
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.800

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