DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBP3 and FAM111A

DIOPT Version :9

Sequence 1:NP_651178.1 Gene:RanBP3 / 42804 FlyBaseID:FBgn0039110 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001135991.1 Gene:FAM111A / 63901 HGNCID:24725 Length:611 Species:Homo sapiens


Alignment Length:108 Identity:28/108 - (25%)
Similarity:38/108 - (35%) Gaps:34/108 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 LTAIDNSGVVKIFLAMGRP----------ADIAQLHKA--LSERIAKRKVSHPEECSVEEAKNGV 372
            :|.:..||::.|   :|.|          |.|.|..:|  ..||:..:|...||.         |
Human   460 ITPVPLSGLIHI---IGHPYGEKKQIDACAVIPQGQRAKKCQERVQSKKAESPEY---------V 512

  Fly   373 ASEAAASLQ-----PESTTHDDEDEDAAPGPSGAISAEADSYG 410
            ......|.|     |:..|:|.|....|.|     |...||.|
Human   513 HMYTQRSFQKIVHNPDVITYDTEFFFGASG-----SPVFDSKG 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBP3NP_651178.1 RanBD_RanBP3 243..352 CDD:270001 11/43 (26%)
FAM111ANP_001135991.1 PIP-box. /evidence=ECO:0000269|PubMed:24561620 16..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..73
Interaction with SV40 large T antigen. /evidence=ECO:0000269|PubMed:23093934 336..611 28/108 (26%)
Trypsin_2 370..555 CDD:379142 28/108 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0866
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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