DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBP3 and ranbp3a

DIOPT Version :10

Sequence 1:NP_651178.1 Gene:RanBP3 / 42804 FlyBaseID:FBgn0039110 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_073771715.1 Gene:ranbp3a / 394115 ZFINID:ZDB-GENE-040426-1132 Length:524 Species:Danio rerio


Alignment Length:492 Identity:154/492 - (31%)
Similarity:204/492 - (41%) Gaps:118/492 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SENNEASVETNCFRGGFTLKASRL--GGA----------------VLRPAVL----ANSSGSNNS 44
            :||:::..|....  ||.||...|  |.|                :|||.||    ..|...||.
Zfish    82 TENSDSEPEEKTV--GFRLKPPTLIHGQAPSAGVPSPKPKEAQRSILRPPVLQPPPVKSPPQNNI 144

  Fly    45 STSPSAG-----------------------EDSALLNNPFLRESKDDDDDEEVVATGSAA---AE 83
            |::.|.|                       |:|..|:...| |.:.||..|:..|...|:   .|
Zfish   145 SSNSSNGVKKLSDGGTECEGHSEASAAGTQENSESLDKSTL-EPETDDKPEQHGAQIDASFVFGE 208

  Fly    84 STGDK----EDDDVDERPDPLTKLRSNGIERSSMF------AAAKNNMPNVQSSGFVFGQNVHER 138
            :..|:    ...|..::.|.|....|.   .::.|      :|.|.:..|..|..||||||:.:|
Zfish   209 NMRDRAKVGNSLDSSQKADGLQTENSG---ETNYFLQCITPSAQKPDSSNANSVKFVFGQNMLDR 270

  Fly   139 VVAPNAEQVTAEPDADTAASSVSAQEAASSSTAATSSSAPLLFSSVIQNAAQTTETSEAAASSSI 203
            ||        |.|...|.|...|.:          |.|...|||.:.....||.|.|:       
Zfish   271 VV--------ALPKFTTDAPGGSRE----------SGSEMGLFSQLSSTQEQTVEKSD------- 310

  Fly   204 CSSSSNNKESAEAKSLTDVAREYEESRAQKRKYEEVETFTGEEDEINIIDVSCKLFAF--LNSNW 266
                 |.|||.|     :.|..:|..:.||...|.||..||||.|.|::.:.||||.|  |:.:|
Zfish   311 -----NMKESLE-----ESAARHEAHKPQKCLLERVEVRTGEESESNVLQMQCKLFVFEMLSQSW 365

  Fly   267 EERGRGSLRLND---AKDLRGDSRVVFRTSGNLRLLLNTKVWAAMVAERASQKSLRLTAIDNSGV 328
            .|||.|.|||||   ..|....||:|.||.|:||::||||:|..|..::||:||||:||||....
Zfish   366 VERGCGVLRLNDKTSTDDGTLQSRLVMRTQGSLRVILNTKLWPQMQVDKASEKSLRITAIDTEEQ 430

  Fly   329 -VKIFLAMGRPADIAQLHKALSERI-AKRKVSHPEECSVEEAKNGVASEAAASLQPESTTHDDED 391
             ||:||......|.|||..||..|| |.|.:|..|........:|           |.....|:|
Zfish   431 GVKVFLISSSSKDAAQLFAALHHRILALRSISGQESDGQPALPDG-----------EIIRFSDDD 484

  Fly   392 EDAAPGPSGAISAEADSYGPSPKKVIVQPDSSADVPV 428
            |...| |:.|..|..:.....|...:.....|||:.|
Zfish   485 ESRTP-PTAATPAPGELPEQRPAACLAHLFISADITV 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBP3NP_651178.1 RanBD_RanBP3 243..352 CDD:270001 57/114 (50%)
ranbp3aXP_073771715.1 None

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