DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBP3 and ranbp3b

DIOPT Version :10

Sequence 1:NP_651178.1 Gene:RanBP3 / 42804 FlyBaseID:FBgn0039110 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_956984.1 Gene:ranbp3b / 393663 ZFINID:ZDB-GENE-040426-1627 Length:525 Species:Danio rerio


Alignment Length:475 Identity:147/475 - (30%)
Similarity:200/475 - (42%) Gaps:120/475 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CFRGGFTLKASRLGGAVLRPAVL-------------ANSS-GSNN-SSTSPSAGED-SALLNNPF 61
            ||.|..:.|......:|||||||             .||| |:|. .....|:.|: |..|||  
Zfish   115 CFPGVPSQKPKEQQRSVLRPAVLQAPAAKTLTEPVKTNSSCGTNGVGKFGDSSSENRSIFLNN-- 177

  Fly    62 LRESKDDDD--DEEVVATGSAAAESTGDKEDDDVD----------ERPDPLTKLRSNGIERSS-- 112
             .||.|...  ::|....|.|..:.:..|:|..||          ||    .||..|.....|  
Zfish   178 -TESSDKSPKREKEGEENGGAQKDDSSQKKDGAVDSSFVFGQNIKER----AKLEENSTNSDSKD 237

  Fly   113 --------------MFAAAKNNMPNVQSSG--FVFGQNVHERVVA-PNAEQVTAEPDADTAASSV 160
                          |.:::.||..|....|  ||||||:.|||:: |...:|:||     |:..|
Zfish   238 STQDPGSTNYFLQYMGSSSSNNATNSSDKGSKFVFGQNMSERVLSPPKGGEVSAE-----ASKEV 297

  Fly   161 SAQEAASSSTAATSSSAPLLFSSVIQNAAQTTETSEAAASSSICSSSSNNKESAEAKSLTDVARE 225
            ||..:..||..||.                                   .|..:..:||.:.|..
Zfish   298 SAPVSEPSSQEATP-----------------------------------EKNHSVTESLEESAAA 327

  Fly   226 YEESRAQKRKYEEVETFTGEEDEINIIDVSCKLFAFLN--SNWEERGRGSLRLND---AKDLRGD 285
            |.::.|:|...|:||..||||.|.|::.:.||||.|..  .:|.|||||.|||||   ..|....
Zfish   328 YTKATAKKCILEKVEVRTGEEAESNVLQMQCKLFVFDKPVQSWVERGRGLLRLNDMASTDDGSLQ 392

  Fly   286 SRVVFRTSGNLRLLLNTKVWAAMVAERASQKSLRLTAIDNSGV-VKIFLAMGRPADIAQLHKALS 349
            ||:|.||.|:|||:||||:|..|..::||:||:|:||:|.... ||:||......|..||..||.
Zfish   393 SRLVMRTQGSLRLILNTKLWPQMQVDKASEKSVRITAMDTEDQGVKVFLISASSKDAGQLAAALH 457

  Fly   350 ERIAKRKVSHPEECSVEEAKNGVASEAAASLQPESTTHD-DEDEDAAPGPSGAISAEADSYGPSP 413
            .||...|      ..||:......:.|...: |:|...| |:|:.|....||..:..:.:.|   
Zfish   458 HRILALK------SRVEQEPESTPAPAEPEI-PQSNEDDSDDDQPANSNSSGGGTGNSTASG--- 512

  Fly   414 KKVIVQPDSSADVPVPPVEE 433
                     :.:...||..|
Zfish   513 ---------NCETSEPPASE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBP3NP_651178.1 RanBD_RanBP3 243..352 CDD:270001 55/114 (48%)
ranbp3bNP_956984.1 RanBD_RanBP3 345..460 CDD:270001 55/114 (48%)

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