Protein Alignment RanBP3 and Nup50

DIOPT Version :10

• Sequence 1: NP_651178.1
• Gene: RanBP3 / 42804
• FlyBaseID: FBgn0039110
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: NP_610355.1
• Gene: Nup50 / 35784
• FlyBaseID: FBgn0033264
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 474
• Identity: 100/474 - (21%)
• Similarity: 162/474 - (34%)
• Gaps: 163/474 - (34%)

  Fly    75 VATGSAAAESTGDKEDDDVDERPDPLTKLRS-NGIERSSMFAAAKNNMPNVQSSGFVFGQNVHER 138
            :|.||:|||..|.:|     :..:|.:.... :|..:.:...||        .|.|.|..|
  Fly    48 IAGGSSAAEEDGAEE-----KTAEPKSVFSGFSGFGKPAASPAA--------GSPFSFLAN---- 95

  Fly   139 VVAPNAEQVTAEPDADT-----AASSVSAQEAASSS---TAATSSSAPLLFSSVIQNAAQTTETS 195
            |.|| |...::||....     ::||.||....|:|   ||:|||:||    |.:.....|:...
  Fly    96 VTAP-ATTSSSEPKKSAFSFGFSSSSSSADRPVSTSICGTASTSSTAP----SPLPAKESTSTVD 155

  Fly   196 EAAASSSICSS-SSNNKESAEAK------SLTDV--AREYEESRAQKRKYEEVETFTGEEDEINI 251
            .|..::||..: |:..|||:|||      |||..  ..||.||                     :
  Fly   156 GAKPTTSIFGNISAAKKESSEAKTSSSSTSLTSTMETSEYRES---------------------V 199

  Fly   252 IDVSCKLFAFLN---------------SNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNLRLLLN 301
            .|::..:..||.               .|::|.         .|||:.:...  ||:       :
  Fly   200 ADLNRSVIKFLQDQMGKSPYCILTPVFKNYDEH---------LKDLQDEESA--RTN-------S 246

  Fly   302 TKVWAAMVAERASQKSL-RLTAIDNSGVVKIFLAMGRP-----ADIAQLHK---------ALSER 351
            ||   :..|:..||:.: :::...:..........|:|     |.::.|.|         ..:..
  Fly   247 TK---SKTAQARSQEPVAKVSRASSPPKAATTFTFGKPSAPIGASVSPLAKKPNCTITSGGTTTT 308

  Fly   352 IAKRKVSH----------PEECSVEEAKNGVASEAAASLQPES----------TTHDDEDEDAAP 396
            .|...||.          |...|:.........||.:...|:|          ||..||...:||
  Fly   309 TATPLVSFGSTASFTAPVPSSSSIFSLTAKPTGEAKSDDTPKSSIFSFGAKDTTTKKDEPNFSAP 373

  Fly   397 GPSG---AISAEAD---------SYGPSPKKV-------------------IVQPDSSADVPVPP 430
            ..:|   .:.:..|         .:|.:|...                   .:.|.::|..|...
  Fly   374 KTNGFSFGLKSNNDDKPSTSLFAGFGKAPGGAGDGAKGFSFTNSATPFSLGNIHPPAAAAAPAEE 438

  Fly   431 VEEGDEDAEAEAKESTDQN 449
            .:|.|...:.|.|:..:.:
  Fly   439 EKEEDTPPKVEFKQVVEDD 457

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RanBP3	NP_651178.1	RanBD_RanBP3	243..352	CDD:270001	20/138 (14%)
Nup50	NP_610355.1	NUP50	3..80	CDD:462629	10/36 (28%)
		RanBD_NUP50	453..563	CDD:269991	0/5 (0%)