DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBP3 and Ranbp3l

DIOPT Version :10

Sequence 1:NP_651178.1 Gene:RanBP3 / 42804 FlyBaseID:FBgn0039110 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_038959469.1 Gene:Ranbp3l / 294789 RGDID:1307559 Length:520 Species:Rattus norvegicus


Alignment Length:402 Identity:114/402 - (28%)
Similarity:175/402 - (43%) Gaps:84/402 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLRPAVL----ANSSGSNNSSTSPSAGEDSALLNNPFLRESKDDDDDEEVVATGSAAAESTGDKE 89
            |||||||    ..|.....::..|.|.:......|   .|.|..:.|..:::...:.|.|:    
  Rat   178 VLRPAVLQPSRTQSCQKGGTTLGPGASKTCETKEN---TEHKISEADSSLLSENLSNARSS---- 235

  Fly    90 DDDVDERPDP-LTKLRSNG--IERSSMFAAAKNNMPNVQSSGFVFGQNVHERVVAPNAEQVTAEP 151
               |....|| :::..|.|  .|....|.:.        ||.||||:|:.|||:  ..:::|..|
  Rat   236 ---VQMSTDPCISEAPSGGHPKEDECSFTSC--------SSDFVFGENMVERVL--GTQKLTQHP 287

  Fly   152 DADTAASSVSAQEAASSSTAATSSSAPLLFSSVIQNAAQTTETSEAAASSSICSSSSNNKESAEA 216
                                             :||.:...|.| ..:.....:.:||:.|..:.
  Rat   288 ---------------------------------LQNLSYAKEKS-FKSLLKFPNVASNSAEPIKN 318

  Fly   217 KSLTDVAREYEESRAQKRKYEEVETFTGEEDEINIIDVSCKLFAF--LNSNWEERGRGSLRLNDA 279
            .||.:.|..:....:||...|:::..||||.|.|::.::||:|.|  ...:|.|||:|.|||||.
  Rat   319 ISLIESAAAFSSKPSQKCLLEKIDVITGEETEHNVLKINCKIFVFNKATQSWSERGQGVLRLNDT 383

  Fly   280 KDLRG---DSRVVFRTSGNLRLLLNTKVWAAMVAERASQKSLRLTAID-NSGVVKIFLAMGRPAD 340
            .....   .||::.|..|:|||:||:::||.|..:|||.||||:||.| ....:||||......|
  Rat   384 AGSECGTLQSRLIMRNQGSLRLVLNSRLWAQMRTQRASHKSLRITATDLEDDRIKIFLIQASAKD 448

  Fly   341 IAQLHKALSER-IAKRKVSHPEECSVEEAKNGVASEAAASLQPE-STTHDDEDEDAAPGPSGAIS 403
            |..|:.|:..| :|.|.:.       ::...|.|.:.|.::.|: |....|||||..        
  Rat   449 IGFLYAAIHHRLVALRSLG-------QQGDGGPAGKQADTVLPQVSGGSCDEDEDDI-------- 498

  Fly   404 AEADSYGPSPKK 415
            .:....||.|.:
  Rat   499 TQVTKTGPDPSR 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBP3NP_651178.1 RanBD_RanBP3 243..352 CDD:270001 51/115 (44%)
Ranbp3lXP_038959469.1 RanBD_RanBP3 345..460 CDD:270001 50/114 (44%)

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