DRSC/TRiP Functional Genomics Resources

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Protein Alignment RanBP3 and RANBP3L

DIOPT Version :9

Sequence 1:NP_651178.1 Gene:RanBP3 / 42804 FlyBaseID:FBgn0039110 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_006714515.1 Gene:RANBP3L / 202151 HGNCID:26353 Length:519 Species:Homo sapiens


Alignment Length:391 Identity:107/391 - (27%)
Similarity:165/391 - (42%) Gaps:97/391 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLRPAVLANSSGSNNSSTSPSAGEDSALLNNPFLRESKDDDDDEEVVATGSAAAES--TGDKEDD 91
            |:|||:|          ..|.| ...|.:...|                |..|.||  |.:|.::
Human   147 VIRPAIL----------QLPQA-RSCAKVRKTF----------------GHKALESCKTKEKTNN 184

  Fly    92 DVDERPDPLTKLRSNGIERSSMFAAAKNN-----------MPNVQ-------SSGFVFGQNVHER 138
            .:.|..   :.|.|..:.|:.:......|           .||..       ||.||||:|:.||
Human   185 KISEGN---SYLLSENLSRARISVQLSTNQDFLGATSVGCQPNEDKCSFKSCSSNFVFGENMVER 246

  Fly   139 VVAPNAEQVTAEPDADTAASSVSAQEAASSSTAATSSSAPLLFSSVIQNAAQTTETSEAAASSSI 203
            |:   ..|...:|.                                ::|.:...|....:.....
Human   247 VL---GTQKLTQPQ--------------------------------LENDSYAKEKPFKSIPKFP 276

  Fly   204 CSSSSNNKESAEAKSLTDVAREYEESRAQKRKYEEVETFTGEEDEINIIDVSCKLFAF--LNSNW 266
            .:..|:..:|.:..||.:.|..:....::|...|:::..||||.|.|::.::||||.|  ...:|
Human   277 VNFLSSRTDSIKNTSLIESAAAFSSQPSRKCLLEKIDVITGEETEHNVLKINCKLFIFNKTTQSW 341

  Fly   267 EERGRGSLRLNDAKDL---RGDSRVVFRTSGNLRLLLNTKVWAAMVAERASQKSLRLTAID-NSG 327
            .|||||:|||||....   ...||::.|..|:|||:||:|:||.|..:||:.|::|:||.| ...
Human   342 IERGRGTLRLNDTASTDCGTLQSRLIMRNQGSLRLILNSKLWAQMKIQRANHKNVRITATDLEDY 406

  Fly   328 VVKIFLAMGRPADIAQLHKALSERIAKRKVSHPEECSVEEAKNGVASEAAASLQPESTTHDDEDE 392
            .:||||......|.|.|:.|:..|:...: |..::..|.:|::  .||.|..|..||.   ||:|
Human   407 SIKIFLIQASAQDTAYLYAAIHHRLVALQ-SFNKQRDVNQAES--LSETAQQLNCESC---DENE 465

  Fly   393 D 393
            |
Human   466 D 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanBP3NP_651178.1 RanBD_RanBP3 243..352 CDD:270001 50/114 (44%)
RANBP3LXP_006714515.1 RanBD_RanBP3 316..431 CDD:270001 50/114 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9167
eggNOG 1 0.900 - - E1_KOG0866
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 165 1.000 Inparanoid score I4189
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001968
OrthoInspector 1 1.000 - - otm41572
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23138
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3882
SonicParanoid 1 1.000 - - X7579
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.950

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