DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn9 and AT4G19006

DIOPT Version :9

Sequence 1:NP_651177.1 Gene:Rpn9 / 42802 FlyBaseID:FBgn0028691 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001329027.1 Gene:AT4G19006 / 827638 AraportID:AT4G19006 Length:439 Species:Arabidopsis thaliana


Alignment Length:419 Identity:137/419 - (32%)
Similarity:218/419 - (52%) Gaps:66/419 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YLATQKKTTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQNFLSTFETK 75
            ||.:| |..:.||...:..:.:||.:|||::||:||..|:.....|...||:|||.||::.|||:
plant     6 YLESQ-KNAHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYNNFITDFETR 69

  Fly    76 INPYGLIQILEVVVDNIGDKKEAIEFLEKMKDKVKI-----CDEAVWYLQVMQGNLYLSNLNDLN 135
            ||...|.....||.....:|:.|:.:||.:.:|:|.     .:|.:.|::. |..|:.....|..
plant    70 INLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIET-QIALFKLEQGDQK 133

  Fly   136 ATKKIIEELRDVLEEAGNVTP-VHGKYYMLASQYYRRVGKHSDYYRCGLQFLG-CSMDEYPRDQW 198
            ..|||:::.:.:|:...::.| |:..::.::|||::...:.|::|:..|.:|. .|:|.......
plant   134 ECKKILDDGKSLLDSMTDIDPSVYANFFWVSSQYHKVRQEFSEFYKNALLYLAYTSVDSLSESFK 198

  Fly   199 AQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMELLKAFNTGDINKFNDMKKI---- 259
            ...||.|.|:||||:.:||.|||||||||:||.||..|||..:|:|||.||:.::.::.::    
plant   199 LDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYHILQAFNHGDLVQYQELCRVHNAS 263

  Fly   260 WSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDIAQETKLPAKEVELLIMKALALD- 323
            .|..|.|...|.||.:||::|||:|:.|.|.|.:|.|..:.||:.|||..::||.|:||:|::. 
plant   264 LSAQPALVENEKKLLEKINILCLIEIIFSRPAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSVST 328

  Fly   324 ----------------------------------------------------LVRGEIDQVAGVV 336
                                                                |:.|.:|||.|.|
plant   329 FFFPLSFSLSHSISNIKNLKKIGKTQTRNLLECVILYWLIVKTEENELLQVHLIEGILDQVNGTV 393

  Fly   337 NMSWVQPRVLNRSQIVGMASTLDTWMGAI 365
            .:||.|||||...||..:...||:|:..:
plant   394 YVSWAQPRVLGIPQIKSLRDQLDSWVDKV 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn9NP_651177.1 PAM 269..361 CDD:214803 43/144 (30%)
AT4G19006NP_001329027.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 134 1.000 Domainoid score I1628
eggNOG 1 0.900 - - E1_KOG2908
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2110
Inparanoid 1 1.050 237 1.000 Inparanoid score I1100
OMA 1 1.010 - - QHG54044
OrthoDB 1 1.010 - - D919955at2759
OrthoFinder 1 1.000 - - FOG0004223
OrthoInspector 1 1.000 - - otm3113
orthoMCL 1 0.900 - - OOG6_101776
Panther 1 1.100 - - O PTHR10539
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2969
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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