DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10232 and psh

DIOPT Version :9

Sequence 1:NP_651175.4 Gene:CG10232 / 42800 FlyBaseID:FBgn0039108 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:416 Identity:111/416 - (26%)
Similarity:167/416 - (40%) Gaps:95/416 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 CQRQEIFPCQYDEICRSRDSC-PFLKLKRKKAQNILMS-RQCGINT----YCCPKQEFPDCPADE 192
            |:..:..|    .|||:...| |.:....|.....|.. ..||:..    :|||.:  |.|.   
  Fly    30 CKVTDTMP----GICRTSSDCEPLIDGYIKSGVLTLNDVPSCGLGAWGEIFCCPTK--PCCD--- 85

  Fly   193 KCIRLDKCLRIHNTTMEDGANLMDNRQCAIDTRRID------SDKRHYICCPE--------PGNV 243
                       ::|......:...:.:..:.:.|:|      .|:.....|.:        .||.
  Fly    86 -----------NSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAVAACKKIRERKQQRSGNQ 139

  Fly   244 LPTSCGQAPPLYRMAYGTAARPNEYPWMAMLIYENRRLSTMTN-NCSGSLINKRYVLTAAHCVVK 307
            |         :..:..|....|..||.||.:.|    ::..|: .|.||||..|:||||||||..
  Fly   140 L---------VIHIVGGYPVDPGVYPHMAAIGY----ITFGTDFRCGGSLIASRFVLTAAHCVNT 191

  Fly   308 DKMVNTDLVLRRVRLGEHDITTNPDCDFTGNCAAPFVEIGIEYFNVHEQYFNTSRFESDIALVRL 372
            |  .||...   ||||..:| .|||..:.        :|.|....:|.||....  .:|||::.|
  Fly   192 D--ANTPAF---VRLGAVNI-ENPDHSYQ--------DIVIRSVKIHPQYVGNK--YNDIAILEL 240

  Fly   373 QTPVRYTHEILPICVPKDPI-PLHNHPLQIAGWGY--TKNREYSQVLLH-----------NTVYE 423
            :..|..|..|.|.|:..|.. |..|....:||||.  ...|..|::||.           |..|.
  Fly   241 ERDVVETDNIRPACLHTDATDPPSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYA 305

  Fly   424 NRYYCQDKISFFRN---ESQICASGIR-GEDSCEGDSGGPLMLTLNNDYQDIVY-LAGIVSYGSE 483
            .:   ...|...:.   :|.:||...: ..|:|:|||||||:..||  .:|.:| :.|::|.|. 
  Fly   306 EQ---PGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELN--VEDGMYTIMGVISSGF- 364

  Fly   484 NCGDRKPGVYTKTGAFFSWIKANLKP 509
            .|....||:||:..::..:|:..:.|
  Fly   365 GCATVTPGLYTRVSSYLDFIEGIVWP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10232NP_651175.4 Tryp_SPc 260..506 CDD:238113 86/265 (32%)
Tryp_SPc 260..503 CDD:214473 85/262 (32%)
pshNP_573297.1 CLIP 30..79 CDD:197829 12/52 (23%)
Tryp_SPc 143..384 CDD:214473 85/266 (32%)
Tryp_SPc 144..387 CDD:238113 86/268 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437412
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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