DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nau and MYOD1

DIOPT Version :10

Sequence 1:NP_476650.1 Gene:nau / 42799 FlyBaseID:FBgn0002922 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_002469.2 Gene:MYOD1 / 4654 HGNCID:7611 Length:320 Species:Homo sapiens


Alignment Length:245 Identity:99/245 - (40%)
Similarity:119/245 - (48%) Gaps:75/245 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EEHVLAPLVCSSAQSSRPCLTWACKACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSN 191
            :|||.||   |....:..||.|||||||:|:...||||||||||||||.|||||||.|||.||||
Human    78 DEHVRAP---SGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSN 139

  Fly   192 PNQRLPKVEILRNAIEYIESLEDLLQESST------------------------TRDGDNLAPSL 232
            |||||||||||||||.|||.|:.||::...                        :.|.|..:|..
Human   140 PNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAAFYAPGPLPPGRGGEHYSGDSDASSPRS 204

  Fly   233 SGKSCQSDY---------LSSYAGAYLEDKLSFYNK--HMEKYGQFTDFDGNANGSSLDCLNLIV 286
            :......||         .:.|.|||       ||:  ...:.|:      :|..||||||:.||
Human   205 NCSDGMMDYSGPPSGARRRNCYEGAY-------YNEAPSEPRPGK------SAAVSSLDCLSSIV 256

  Fly   287 QSINKSTTSPI-----------------QNKATPSASD-----TQSPPSS 314
            :.|  ||.||.                 |..|.||..:     ||||.::
Human   257 ERI--STESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQSPDAA 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nauNP_476650.1 Basic 89..166 CDD:472231 20/38 (53%)
bHLH_TS_dMYOD_like 161..216 CDD:381542 47/54 (87%)
MYOD1NP_002469.2 BASIC 19..114 CDD:128794 20/38 (53%)
bHLH_TS_MYOD1_Myf3 105..165 CDD:381506 48/59 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..219 5/44 (11%)
Myf5 191..259 CDD:463500 21/80 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..320 10/43 (23%)

Return to query results.
Submit another query.