DRSC/TRiP Functional Genomics Resources

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Protein Alignment nau and Myog

DIOPT Version :9

Sequence 1:NP_476650.1 Gene:nau / 42799 FlyBaseID:FBgn0002922 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_058811.2 Gene:Myog / 29148 RGDID:620432 Length:224 Species:Rattus norvegicus


Alignment Length:237 Identity:89/237 - (37%)
Similarity:113/237 - (47%) Gaps:64/237 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 YSHANHNPVELD--KPLG-----MNMTP---SPIYTTDYDDENSSLSSEEHVLAPLVCSSAQSSR 143
            |...|:.||.|.  :|.|     ::::|   .|:       |...|.:.||      |..     
  Rat    17 YDGENYLPVHLQGFEPPGYERTELSLSPEARGPL-------EEKGLGTPEH------CPG----- 63

  Fly   144 PCLTWACKACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVEILRNAIEY 208
            .||.||||.||:|||:||||:|||:||:|||:|||||||.|||.|..|||||||||||||:||:|
  Rat    64 QCLPWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQY 128

  Fly   209 IESLEDLL----QESSTT--RDGDNLAPSLSGKSCQSDYLSSYAGAYLEDKLSFYNKHMEKYGQF 267
            ||.|:.||    ||....  |.|....|.:..: |.|...|.                ..::|..
  Rat   129 IERLQALLSSLNQEERDLRYRGGGGPQPVVPSE-CNSHSASC----------------SPEWGNA 176

  Fly   268 TDFDGN----------ANGSSLDCLNLIVQSI---NKSTTSP 296
            .:|..|          ....:|..|..||.||   :.|.|.|
  Rat   177 LEFGPNPGDHLLAADPTGAHNLHSLTSIVDSITVEDMSVTFP 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nauNP_476650.1 Basic 89..166 CDD:299793 29/86 (34%)
HLH 162..213 CDD:278439 39/50 (78%)
MyogNP_058811.2 BASIC 1..86 CDD:128794 29/86 (34%)
bHLH_TS_MYOG_Myf4 81..139 CDD:381505 43/57 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353044
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000989
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11534
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X581
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.840

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