DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10300 and AT1G55840

DIOPT Version :9

Sequence 1:NP_651174.2 Gene:CG10300 / 42798 FlyBaseID:FBgn0039107 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_175980.1 Gene:AT1G55840 / 842034 AraportID:AT1G55840 Length:325 Species:Arabidopsis thaliana


Alignment Length:93 Identity:21/93 - (22%)
Similarity:39/93 - (41%) Gaps:26/93 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 LKKAFALVDQCIP----LRFVEIHMINMRKEGQTIF--------NFVTKFLPSKL-PFKFVVHKK 231
            |::::..:.|..|    |||::....|::|..:.:.        |.:.|.|...: |.       
plant    23 LRESYRNIHQGYPTENLLRFLKARDGNVQKAHKMLLECLEWRTQNEIDKILTKPIVPV------- 80

  Fly   232 SEDLYQHLPRDVMTIEYGGTNGYQAEAV 259
              |||:.: ||...:   |.:||..|.:
plant    81 --DLYRGI-RDTQLV---GVSGYSKEGL 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10300NP_651174.2 SEC14 95..251 CDD:238099 17/83 (20%)
AT1G55840NP_175980.1 CRAL_TRIO_N 8..59 CDD:397711 8/35 (23%)
SEC14 91..242 CDD:214706 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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