DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10300 and rlbp1

DIOPT Version :9

Sequence 1:NP_651174.2 Gene:CG10300 / 42798 FlyBaseID:FBgn0039107 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:247 Identity:60/247 - (24%)
Similarity:104/247 - (42%) Gaps:15/247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AKSECNEEQAQRAEIIATIKTWITKSPH-----LKAPTD------EQLILAFLRRCRFSQEETKR 69
            ||.|.||.:.:|...:..::..:.:..:     .||..|      :...|.|:|..:|.......
 Frog    48 AKDELNETEEKRESAVKELRALVQEKANAGEELCKAVADKVKDKGDDFFLRFIRARKFDVSRAYE 112

  Fly    70 RFDNYYSLRSVFPEVLGSRQVDEALLTQLQRGIHVIPMRPVSPEGPRVIISQFRNIDPKKSNPRE 134
            ....|.:.|..:|| |......||:.:.::.|...| :......|..:::....:.|.::....|
 Frog   113 LLKGYVNFRQQYPE-LFEDLTPEAVRSTIEAGYPGI-LTSRDKNGRVILLFNIESWDYEEITFDE 175

  Fly   135 AFKLIFIMLELLALECDNAAISGLIWVVDARDVTMEQMMQYDPFLLKKAFALVDQCIPLRFVEIH 199
            ..:...|:||.| ||.:...|:|...:.:.:..||:|.....|..|||...::....|.||..:|
 Frog   176 ILRAYCIILESL-LENEETQINGFCIIENFKGFTMQQASGIKPSELKKMVDMLQDSFPARFKAVH 239

  Fly   200 MINMRKEGQTIFNFVTKFLPSKLPFKFVVHKKS-EDLYQHLPRDVMTIEYGG 250
            .|:......|.:|.|..||.|||..:..||... |..|:.:..|::..::||
 Frog   240 FIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLEGFYKEIDADILPADFGG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10300NP_651174.2 SEC14 95..251 CDD:238099 40/157 (25%)
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 7/56 (13%)
CRAL_TRIO 143..292 CDD:306996 40/151 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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