DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10300 and rlbp1a

DIOPT Version :9

Sequence 1:NP_651174.2 Gene:CG10300 / 42798 FlyBaseID:FBgn0039107 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:256 Identity:60/256 - (23%)
Similarity:103/256 - (40%) Gaps:31/256 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AKSECNEEQAQRA------------------EIIATIKTWITKSPHLKAPTDEQLILAFLRRCRF 62
            ||.|.||...:||                  |:..|::....|.|       :.|:|.|:|..:|
Zfish    47 AKDELNETDEKRASAIKELRAMIKDKAGQGDEVAKTVQDKFGKEP-------DSLLLRFIRARKF 104

  Fly    63 SQEETKRRFDNYYSLRSVFPEVLGSRQVDEALLTQLQRGI-HVIPMRPVSPEGPRVIISQFRNID 126
            ...........|...|..:|| |......||:.:.::.|. .::..|  ...|..|::....|.|
Zfish   105 DVARAHELMKGYVRFRRDYPE-LFENLTPEAVRSTIEAGYPRILSTR--DKNGRVVLLFNIDNWD 166

  Fly   127 PKKSNPREAFKLIFIMLELLALECDNAAISGLIWVVDARDVTMEQMMQYDPFLLKKAFALVDQCI 191
            .::....|..:...::||.| ||.:...|:|.:.:.:.:..||:.........|||...::....
Zfish   167 LEEVTFDETLRAYCVILEKL-LENEETQINGFVLIENFKGFTMQHASGIKHTELKKMVDMLQDSF 230

  Fly   192 PLRFVEIHMINMRKEGQTIFNFVTKFLPSKLPFKFVVHKKSEDLY-QHLPRDVMTIEYGGT 251
            |.||..:|:|:......|.:|.|..|:.|||..:..||....|.| :....:::..::.||
Zfish   231 PARFKAVHVIHQPWYFTTTYNVVKPFMKSKLLERVFVHGDELDGYLRDFGAEILPPDFDGT 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10300NP_651174.2 SEC14 95..251 CDD:238099 35/157 (22%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 10/63 (16%)
CRAL_TRIO 142..291 CDD:279044 35/151 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579389
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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