DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG10300 and F28H7.8

DIOPT Version :9

Sequence 1:	NP_651174.2	Gene:	CG10300 / 42798	FlyBaseID:	FBgn0039107	Length:	311	Species:	Drosophila melanogaster
Sequence 2:	NP_505746.2	Gene:	F28H7.8 / 185099	WormBaseID:	WBGene00009241	Length:	410	Species:	Caenorhabditis elegans

Alignment Length:	201	Identity:	41/201 - (20%)
Similarity:	74/201 - (36%)	Gaps:	69/201 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   109 PVSPEGPR--------VIISQFRNID----PKKSNPREAFKLIF-----IMLELLALECDNAAIS 156
            |:...||:        |::.:...||    .|...|.|....:|     |...|:.:|.:.....
Worm    90 PIDIIGPQRKEDGDRLVVVDRAGRIDVSGLMKSVQPTEYLHEMFRSFEEIQRRLMKMEAETGVQC 154

  Fly   157 GLIWVVDARDVTMEQMMQYDPFLLKKAFALVDQCIPLRFVEIHMINMRKEGQTIFNFVTKFL--- 218
            .:.::.|.      :.:.:||.||    .:|:.  |.|      ::.:..||....|:.||:
Worm   155 YMHYIFDL------EALNFDPTLL----GVVNG--PFR------VSWQLVGQHYREFIDKFIVIN 201

  Fly   219 -PSKL--------PFKFVVHKKSEDLYQHLPRDVMTIEYGGTNGYQAEAVDHWRQKLLDSKDYLA 274
             ||.:        ||   :.::|:          ..|.:.|:|         |:::|||..|...
Worm   202 SPSYINVLWSALSPF---IPEQSK----------QRIVFAGSN---------WKEELLDIVDKEC 244

  Fly   275 KDAQYG 280
            ...:||
Worm   245 LPERYG 250

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG10300	NP_651174.2	SEC14	95..251	CDD:238099	32/170 (19%)
F28H7.8	NP_505746.2	CRAL_TRIO_N	16..61	CDD:215024
F28H7.8	NP_505746.2	SEC14	93..251	CDD:214706	40/198 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810