DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10300 and clvs1

DIOPT Version :9

Sequence 1:NP_651174.2 Gene:CG10300 / 42798 FlyBaseID:FBgn0039107 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_012819596.1 Gene:clvs1 / 100037913 XenbaseID:XB-GENE-5740434 Length:332 Species:Xenopus tropicalis


Alignment Length:274 Identity:63/274 - (22%)
Similarity:119/274 - (43%) Gaps:14/274 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LDPKLAALAKSECNEEQAQRAEIIATIKTWITKSPHLK-APTDEQLILAFLRRCRFSQEETKRRF 71
            |.|:....::.|.||......:.|..::..|...|.:. ..||:..||.|||..:|:|.|..|..
 Frog     8 LSPETIEKSRLELNENPDTLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFNQMEAFRLL 72

  Fly    72 DNYYSLRSVFPEVLGSRQVDE-ALLTQLQRGI-HVIPMRPVSPEGPRVIISQFRNIDPKKSNPRE 134
            ..|:..|.:..::..:.:.|: .:...|..|. .|:..|  ...|.::::....|.|..:::..:
 Frog    73 AQYFQYRQLNLDMFKNLKADDPGIKRALMDGFPGVLENR--DHYGRKILLLFAANWDQSRNSFVD 135

  Fly   135 AFKLIFIMLELLALECDNAAISGLIWVVDARDVTMEQMMQYDPFLLKKAFALVDQCIPLRFVEIH 199
            ..:.|.:.||:| :|.....|:|.|.::|..:.:.:|..:..|.:|:.|...:....|.||..:|
 Frog   136 ILRAILLSLEVL-IEDQELQINGFILIIDWSNFSFKQASKLTPSILRLAIEGLQDSFPARFGGVH 199

  Fly   200 MINMRKEGQTIFNFVTKFLPSKLPFKFVVHKKS-EDLYQHLPRDVMTIEYGGTNGYQAEAVDHWR 263
            .:|.......::..:..||..|...:..:|..: ..|:|.:..|.:..|:|||  .....:..|.
 Frog   200 FVNQPWYIHALYTIIKPFLKDKTRKRIFLHGNNLNSLHQLIHPDCLPSEFGGT--LPPYDMGTWA 262

  Fly   264 QKLL-----DSKDY 272
            :.||     |..:|
 Frog   263 RTLLGPDYNDENEY 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10300NP_651174.2 SEC14 95..251 CDD:238099 34/157 (22%)
clvs1XP_012819596.1 CRAL_TRIO_N 29..75 CDD:215024 14/45 (31%)
SEC14 106..252 CDD:238099 32/148 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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