DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10301 and rlbp1a

DIOPT Version :9

Sequence 1:NP_651173.2 Gene:CG10301 / 42797 FlyBaseID:FBgn0039106 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:254 Identity:54/254 - (21%)
Similarity:98/254 - (38%) Gaps:27/254 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AEQEVNETPDRIQQDIIILRVWIRQ---QPHLRARTDVD--------FLIAFLRRCRYSLEETKR 66
            |:.|:|||.::....|..||..|:.   |....|:|..|        .|:.|:|..::.:.....
Zfish    47 AKDELNETDEKRASAIKELRAMIKDKAGQGDEVAKTVQDKFGKEPDSLLLRFIRARKFDVARAHE 111

  Fly    67 RIDRYFTHYNLFPEIMNNRCVTQRLLDINRMGVCLYPDMPKGDSRSAMFIARFG--HFDPNLYML 129
            .:..|......:||:..| ...:.:......|   ||.:.....::...:..|.  ::|......
Zfish   112 LMKGYVRFRRDYPELFEN-LTPEAVRSTIEAG---YPRILSTRDKNGRVVLLFNIDNWDLEEVTF 172

  Fly   130 REIYHFSSMAMEVIALENDYASLAGICEIIDLEGVNSDKMRRFDRVLFRKWWNWLYNCSPLKVKE 194
            .|......:.:|.: |||:...:.|...|.:.:|..............:|..:.|.:..|.:.|.
Zfish   173 DETLRAYCVILEKL-LENEETQINGFVLIENFKGFTMQHASGIKHTELKKMVDMLQDSFPARFKA 236

  Fly   195 MYIINMPKDIQGTVMFLYNVLS--MQVNYPIRVLKNSEEL---IEHIGKESLPEEYGGT 248
            :::|:.|.....|    |||:.  |:.....||..:.:||   :...|.|.||.::.||
Zfish   237 VHVIHQPWYFTTT----YNVVKPFMKSKLLERVFVHGDELDGYLRDFGAEILPPDFDGT 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10301NP_651173.2 CRAL_TRIO_N 25..71 CDD:215024 11/56 (20%)
CRAL_TRIO 114..248 CDD:279044 29/140 (21%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 11/56 (20%)
CRAL_TRIO 142..291 CDD:279044 32/156 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579391
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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