DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10301 and Rlbp1

DIOPT Version :9

Sequence 1:NP_651173.2 Gene:CG10301 / 42797 FlyBaseID:FBgn0039106 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001099744.1 Gene:Rlbp1 / 293049 RGDID:1309649 Length:317 Species:Rattus norvegicus


Alignment Length:277 Identity:55/277 - (19%)
Similarity:107/277 - (38%) Gaps:64/277 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TLAKLAEQEVNETPDRIQQDIIILRVWIRQQ------------PHLRARTDVDFLIAFLRRCRYS 60
            ||.| |:.|:||..:...:.:..|:..::.|            ..::|| |..||:.|:|..::.
  Rat    44 TLQK-AKDELNEREETRDEAVRELQELVQAQAASGEELAVAVAERVQAR-DSAFLLRFIRARKFD 106

  Fly    61 LEETKRRIDRYFTHYNLFPEIMNN------RCVTQRLLDINRMGVCLYPDMPKGDSRSAMFIARF 119
            :......:..|......:||:.::      ||..:          ..||.:.....:....:..|
  Rat   107 VGRAYELLKGYVNFRLQYPELFDSLSMEALRCTIE----------AGYPGVLSSRDKYGRVVMLF 161

  Fly   120 GHFDPNLYMLREIYHFSSMAMEVI----------ALENDYASLAGICEIIDLEGVNSDK---MRR 171
                 |:    |.:|...:..:.|          .|||:...:.|.|.:.:.:|....:   :|.
  Rat   162 -----NI----ENWHCEEVTFDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQQAAGLRP 217

  Fly   172 FDRVLFRKWWNWLYNCSPLKVKEMYIINMPKDIQGTVMFLYNVLSMQVNYPI--RVLKNSEEL-- 232
            .|   .:|..:.|.:..|.:.|.::.|:.|.....|    |||:...:...:  ||..:.::|  
  Rat   218 SD---LKKMVDMLQDSFPARFKAIHFIHQPWYFTTT----YNVVKPFLKNKLLQRVFVHGDDLDG 275

  Fly   233 -IEHIGKESLPEEYGGT 248
             .:.|.:..||.::|||
  Rat   276 FFQEIDENILPADFGGT 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10301NP_651173.2 CRAL_TRIO_N 25..71 CDD:215024 9/57 (16%)
CRAL_TRIO 114..248 CDD:279044 30/151 (20%)
Rlbp1NP_001099744.1 CRAL_TRIO_N 60..117 CDD:215024 9/57 (16%)
CRAL_TRIO 143..292 CDD:279044 32/164 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339626
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

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