DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gba1a and Gba

DIOPT Version :9

Sequence 1:NP_651172.1 Gene:Gba1a / 42796 FlyBaseID:FBgn0051148 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001121111.1 Gene:Gba / 684536 RGDID:1589149 Length:515 Species:Rattus norvegicus


Alignment Length:559 Identity:178/559 - (31%)
Similarity:282/559 - (50%) Gaps:63/559 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LGVLLVSAIGGQSESIPCKLIDAEHG---KVCVCTADYCDYLENPVLTDENEWFLISSSKQGLRF 74
            :|:.|..||.....:.||  |....|   .||||.|.|||.|:...|.....:....|::.|.|.
  Rat     6 IGLFLFQAISWAYGAQPC--IPKSFGYSSVVCVCNATYCDSLDPLTLPALGTFSRYESTRSGRRM 68

  Fly    75 STTSDKFGKEEKFTVQDYVEPTQETANATILSRLLDKVVDSAFTLESRESSITRTVTLRLDRSKT 139
            ..::.        ::|         ||.|....||        ||:..|.               
  Rat    69 ELSTG--------SIQ---------ANRTGTGLLL--------TLQPEEK--------------- 93

  Fly   140 HQKMVGFGGSYTG--AVEYLVENFKHSELADHLYKSFYAEDGLGFNLMRVSIGGCDFDLEPWSYA 202
            .||:.||||:.|.  |:..|..:....:|   |.||:::.:|:.:|::||.:..|||.:..::||
  Rat    94 FQKVKGFGGAMTDATALNILALSPPAQKL---LLKSYFSSEGIEYNIIRVPMASCDFSIRIYTYA 155

  Fly   203 EEEGDTELSDMDELNAHDVTRVAQIKRLIEVSGVKNLLVKGAAWSSPPWMKTNNRWTGFGRLK-- 265
            :...|.:||:..........::..|.|.:::| .:.:.:..:.|:||.|:|||....|.|.||  
  Rat   156 DTPNDFQLSNFSLPEEDTKLKIPLIHRALKMS-PRPISLFASPWTSPTWLKTNGAVNGKGSLKGH 219

  Fly   266 --RAYYQTWADYHLRWLRLMKDNGIPIWAISTGNEPLNGIIFMYFVKFMSLGWTPQTQAIWLNDY 328
              ..|::.||:|.:::|.....:.|..||::..|||..|:...|  .|..||:|.:.|..:::..
  Rat   220 PGDIYHEAWANYFVKFLDAYATHNIKFWAVTAENEPSAGLFTGY--PFQCLGFTAEHQRDFISHD 282

  Fly   329 LGPTIRNSEFKDITLFGNDDQRYSFPHWFKMMNRTRPNSIDYLDGLSLHWYWDEIF-GNSFIEQT 392
            |||.:.||. .|:.|...||||...|.|.::: .:.|.:..|:.|:::|||.|.:. ..:.:.:|
  Rat   283 LGPALANSS-HDVKLLILDDQRLLLPRWAQVV-LSDPEAAKYVHGIAVHWYMDFLAPAKATLGET 345

  Fly   393 KEYAPDKILIVSESCIGDKPWQAAAPLLGSWERAEKYARDYLLNIKLGFHGWIDWNICLDEIGGP 457
            ....|:.:|..||:|:|.|.|:.:. .||||:|..:|:...:.|:.....||.|||:.|:..|||
  Rat   346 HRLFPNMMLFASEACVGSKFWEQSV-RLGSWDRGMQYSHSIITNLLYHVTGWTDWNLALNPEGGP 409

  Fly   458 NYVDNTVDAPVIVNTTTFEEFYKQPMFYAIGHFSKWVPEGSVRIDAVPS-NVNLDSVAFLRPDNK 521
            |:|.|.||:|:||:... :.||||||||.:|||||::||||.|:..|.| ..:|::||.:|||..
  Rat   410 NWVRNFVDSPIIVDIPK-DTFYKQPMFYHLGHFSKFIPEGSQRVGLVASEKTDLETVALIRPDGS 473

  Fly   522 ITAVLFNSGRADLDITLVDSIRGQFVVNVPAKSIHTLLY 560
            ...|:.|....|:.:|:.|...|......|..||||.|:
  Rat   474 AVVVVLNRSSKDVPLTISDPALGFMETISPGYSIHTYLW 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gba1aNP_651172.1 Glyco_hydro_30 29..558 CDD:304972 172/539 (32%)
GbaNP_001121111.1 Glyco_hydro_30 20..512 CDD:304972 173/543 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352289
Domainoid 1 1.000 232 1.000 Domainoid score I2327
eggNOG 1 0.900 - - E1_COG5520
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 285 1.000 Inparanoid score I2770
OMA 1 1.010 - - QHG62715
OrthoDB 1 1.010 - - D206521at33208
OrthoFinder 1 1.000 - - FOG0004266
OrthoInspector 1 1.000 - - otm44865
orthoMCL 1 0.900 - - OOG6_102859
Panther 1 1.100 - - O PTHR11069
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3004
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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