DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gba1a and GBA

DIOPT Version :9

Sequence 1:NP_651172.1 Gene:Gba1a / 42796 FlyBaseID:FBgn0051148 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_000148.2 Gene:GBA / 2629 HGNCID:4177 Length:536 Species:Homo sapiens


Alignment Length:563 Identity:184/563 - (32%)
Similarity:285/563 - (50%) Gaps:72/563 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GVLLVSAIGGQSESIPCKLIDAEHG---KVCVCTADYCDYLENPVLTDENEWFLISSSKQGLRFS 75
            |:||:.|:...|.:.||  |....|   .||||.|.|||..:.|.......:....|::.|.|..
Human    27 GLLLLQAVSWASGARPC--IPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRME 89

  Fly    76 TTSDKFGKEEKFTVQDYVEPTQETANATILSRLLDKVVDSAFTLESRESSITRTVTLRLDRSKTH 140
            .:               :.|.|  ||.|....||        ||:..:.               .
Human    90 LS---------------MGPIQ--ANHTGTGLLL--------TLQPEQK---------------F 114

  Fly   141 QKMVGFGGSYTGAVEYLV-------ENFKHSELADHLYKSFYAEDGLGFNLMRVSIGGCDFDLEP 198
            ||:.||||:.|.|....:       :|.        |.||:::|:|:|:|::||.:..|||.:..
Human   115 QKVKGFGGAMTDAAALNILALSPPAQNL--------LLKSYFSEEGIGYNIIRVPMASCDFSIRT 171

  Fly   199 WSYAEEEGDTELSDMDELNAHDVTRVAQIKRLIEVSGVKNLLVKGAAWSSPPWMKTNNRWTGFGR 263
            ::||:...|.:|.:..........::..|.|.:::: .:.:.:..:.|:||.|:|||....|.|.
Human   172 YTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLA-QRPVSLLASPWTSPTWLKTNGAVNGKGS 235

  Fly   264 LK----RAYYQTWADYHLRWLRLMKDNGIPIWAISTGNEPLNGIIFMYFVKFMSLGWTPQTQAIW 324
            ||    ..|:||||.|.:::|....::.:..||::..|||..|::..|  .|..||:||:.|..:
Human   236 LKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGY--PFQCLGFTPEHQRDF 298

  Fly   325 LNDYLGPTIRNSEFKDITLFGNDDQRYSFPHWFKMMNRTRPNSIDYLDGLSLHWYWDEIF-GNSF 388
            :...||||:.||...::.|...||||...|||.|:: .|.|.:..|:.|:::|||.|.:. ..:.
Human   299 IARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVV-LTDPEAAKYVHGIAVHWYLDFLAPAKAT 362

  Fly   389 IEQTKEYAPDKILIVSESCIGDKPWQAAAPLLGSWERAEKYARDYLLNIKLGFHGWIDWNICLDE 453
            :.:|....|:.:|..||:|:|.|.|:.:. .||||:|..:|:...:.|:.....||.|||:.|:.
Human   363 LGETHRLFPNTMLFASEACVGSKFWEQSV-RLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNP 426

  Fly   454 IGGPNYVDNTVDAPVIVNTTTFEEFYKQPMFYAIGHFSKWVPEGSVRIDAVPSNVN-LDSVAFLR 517
            .||||:|.|.||:|:||:.|. :.||||||||.:|||||::||||.|:..|.|..| ||:||.:.
Human   427 EGGPNWVRNFVDSPIIVDITK-DTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMH 490

  Fly   518 PDNKITAVLFNSGRADLDITLVDSIRGQFVVNVPAKSIHTLLY 560
            ||.....|:.|....|:.:|:.|...|......|..||||.|:
Human   491 PDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLW 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gba1aNP_651172.1 Glyco_hydro_30 29..558 CDD:304972 177/544 (33%)
GBANP_000148.2 Glyco_hydro_30 117..466 CDD:307945 126/362 (35%)
Glyco_hydro_30C 469..531 CDD:319207 22/61 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158305
Domainoid 1 1.000 240 1.000 Domainoid score I2262
eggNOG 1 0.900 - - E1_COG5520
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 295 1.000 Inparanoid score I2758
Isobase 1 0.950 - 0 Normalized mean entropy S4252
OMA 1 1.010 - - QHG62715
OrthoDB 1 1.010 - - D206521at33208
OrthoFinder 1 1.000 - - FOG0004266
OrthoInspector 1 1.000 - - otm40726
orthoMCL 1 0.900 - - OOG6_102859
Panther 1 1.100 - - O PTHR11069
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3004
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.720

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