DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and LOC733714

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001037956.1 Gene:LOC733714 / 733714 -ID:- Length:425 Species:Xenopus tropicalis


Alignment Length:468 Identity:147/468 - (31%)
Similarity:237/468 - (50%) Gaps:79/468 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NQRRLILVIVSIALLLDNMLYMVIVPIIPD--YLREIGS------FDDGPTPPPLRDNITGKIIP 85
            :.|.|||.:|::|:::|.:|:.::.||.|.  |..|.|:      .::.......||:|......
 Frog    10 DSRWLILFVVAVAMVMDYILFTIVAPIAPALLYDTEYGNRNTTVLLNNSSGSSLYRDSIINNTES 74

  Fly    86 V--------HHDHHGQDSA-TGILFASKAIVQLMVNPFSGGLIDKIGYDLPMMIGLTIMFFSTAV 141
            .        ..|:..:::. .|:|.|.||::||:.||..|.:|::.|||.|:..|..|||.||.:
 Frog    75 AGNQTQCYEEKDYLNEENVLVGLLLAIKALLQLLTNPIVGKIINRTGYDAPLFCGTIIMFLSTLM 139

  Fly   142 FACGSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGG 206
            ||...||:.|..||.|||.||:|.....|.|:|..|.::.||.:|:||||:.::.|.|..||||.
 Frog   140 FAFADSYAFLCVARGLQGIGSSFTAVPALGMLAHVFPDDAERGKAMGIALSGVAIGVLAGPPFGS 204

  Fly   207 ALYQFAGKEVPFLILALVCLLDGLMLLLVMKPVKEAMKQSKDVQDQVIPIWRLLMDPYIAVCAGA 271
            |:|:|.||..|||.:|.:.||||::.|.:::|.:     ...|.....|...|||||||.|.|..
 Frog   205 AMYEFVGKSAPFLAIAALALLDGVLQLCILRPTR-----FSTVDVPATPYKNLLMDPYILVAAVG 264

  Fly   272 LTMSNVALAFLEPTISLWMEDNMTTDNWKIGMVWLPAFFPHVLGVVITVKMARKYPQHQWLMAAG 336
            |.:.|:....||.|:.:.|.:.|....:::|:.:||....:.:.:.:..::|:|         .|
 Frog   265 LCICNLTFGMLETTLPIRMMETMCAPRYQLGLCFLPCIVAYFICLNVFAELAQK---------IG 320

  Fly   337 GLALEGFSCFIIPFCSGYKMLMLPICVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADIS 401
            ..||.                        .|..:::|:::|.:.:|||:|:.|.||.||||:||:
 Frog   321 SAALG------------------------IGFGMMETSVMPLMAHLVDLRHTSNYGGIYAISDIA 361

  Fly   402 YSIAYAVGPIIAGGVVEAIGFTALNFLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNK 466
            ..|.||:||...|.:.:|:||..|..::...||.:.|:.                 ||:::||.|
 Frog   362 LCIGYALGPSCGGAIAKAVGFKWLMIILGIINLVFAPLF-----------------ILLRNPPGK 409

  Fly   467 EYQTYVMHDQKPV 479
            |       :.||:
 Frog   410 E-------ETKPL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 112/322 (35%)
2_A_01_02 98..238 CDD:273318 65/139 (47%)
LOC733714NP_001037956.1 MFS_1 94..370 CDD:284993 111/313 (35%)
2_A_01_02 96..237 CDD:273318 65/140 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59108
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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