DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and SLC18A2

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_003045.2 Gene:SLC18A2 / 6571 HGNCID:10935 Length:514 Species:Homo sapiens


Alignment Length:553 Identity:192/553 - (34%)
Similarity:294/553 - (53%) Gaps:100/553 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LEVREVKDIVWEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYL--------------- 60
            :.:.|:..:.|  :||....|:|||.||.:||||||||..|:|||||.||               
Human     1 MALSELALVRW--LQESRRSRKLILFIVFLALLLDNMLLTVVVPIIPSYLYSIKHEKNATEIQTA 63

  Fly    61 ------------REIGSFDDGPTPPPLRDNITG---KIIPVHH---------------------- 88
                        :.|.|:.|..|      .:||   :.:.:|.                      
Human    64 RPVHTASISDSFQSIFSYYDNST------MVTGNATRDLTLHQTATQHMVTNASAVPSDCPSEDK 122

  Fly    89 DHHGQDSATGILFASKAIVQLMVNPFSGGLIDKIGYDLPMMIGLTIMFFSTAVFACGSSYSVLFF 153
            |...::...|:||||||.|||:.|||.|.|.::|||.:|:..|..|||.||.:||..|||:.|..
Human   123 DLLNENVQVGLLFASKATVQLITNPFIGLLTNRIGYPIPIFAGFCIMFVSTIMFAFSSSYAFLLI 187

  Fly   154 ARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPF 218
            ||||||.||:.:..||:.|:|..:|::.||...:||||..::.|.||.||||..||:|.||..||
Human   188 ARSLQGIGSSCSSVAGMGMLASVYTDDEERGNVMGIALGGLAMGVLVGPPFGSVLYEFVGKTAPF 252

  Fly   219 LILALVCLLDGLMLLLVMKPVKEAMKQSKDVQDQVIPIWRLLMDPYIAVCAGALTMSNVALAFLE 283
            |:||.:.||||.:.|.|::|.:...:..|..     |:..||.||||.:.||::..:|:.:|.||
Human   253 LVLAALVLLDGAIQLFVLQPSRVQPESQKGT-----PLTTLLKDPYILIAAGSICFANMGIAMLE 312

  Fly   284 PTISLWMEDNMTTDNWKIGMVWLPAFFPHVLGV----VITVKMARKYPQHQWLMAAGGLALEGFS 344
            |.:.:||.:.|.:..|::|:.:|||...:::|.    ::..||.|      ||.|..|:.:.|.|
Human   313 PALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGILAHKMGR------WLCALLGMIIVGVS 371

  Fly   345 CFIIPFCSGYKMLMLPICVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVG 409
            ...|||......|:.|...:.|.|.::|::::|.:|||||:|:||||||:|||||:::.:.||:|
Human   372 ILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSVYAIADVAFCMGYAIG 436

  Fly   410 PIIAGGVVEAIGFTALNFLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNKEYQTYVMH 474
            |...|.:.:||||..|..:|...::.:.|:...||:                 ||.||.:..::.
Human   437 PSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRS-----------------PPAKEEKMAILM 484

  Fly   475 DQK-PVEGGV--KNHLEYGQQYQ--QEQETNLD 502
            |.. |::..:  :|::   |.|.  :::|:..|
Human   485 DHNCPIKTKMYTQNNI---QSYPIGEDEESESD 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 136/347 (39%)
2_A_01_02 98..238 CDD:273318 73/139 (53%)
SLC18A2NP_003045.2 MFS_1 130..437 CDD:311564 135/317 (43%)
2_A_01_02 132..273 CDD:273318 73/140 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59108
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2004
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.960

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