DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and SLC18A1

DIOPT Version :10

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_003044.1 Gene:SLC18A1 / 6570 HGNCID:10934 Length:525 Species:Homo sapiens


Alignment Length:581 Identity:189/581 - (32%)
Similarity:300/581 - (51%) Gaps:119/581 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VREVKDIVWEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLRE--------------- 62
            :|.:.|.....::|....|:|:||:|.:||||||||:.|:|||:|.:|.:               
Human     2 LRTILDAPQRLLKEGRASRQLVLVVVFVALLLDNMLFTVVVPIVPTFLYDMEFKEVNSSLHLGHA 66

  Fly    63 --------------IGSFDDGPT---------------------PPPLRDNITGKIIPVHHDHHG 92
                          |.||.:..|                     |||..:.|:     .|.::..
Human    67 GSSPHALASPAFSTIFSFFNNNTVAVEESVPSGIAWMNDTASTIPPPATEAIS-----AHKNNCL 126

  Fly    93 QDSA--------TGILFASKAIVQLMVNPFSGGLIDKIGYDLPMMIGLTIMFFSTAVFACGSSYS 149
            |.:.        .|:||||||::||:||||.|.|.::|||.:||..|..|||.||.:||...:|:
Human   127 QGTGFLEEEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLSTVMFAFSGTYT 191

  Fly   150 VLFFARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGK 214
            :||.||:|||.||:|:..|||.|:|..:|:::||.:|:|.||..::.|.||..|||..:|:|.||
Human   192 LLFVARTLQGIGSSFSSVAGLGMLASVYTDDHERGRAMGTALGGLALGLLVGAPFGSVMYEFVGK 256

  Fly   215 EVPFLILALVCLLDGLMLLLVMKPVKEAMKQSKDVQDQVIPIWRLLMDPYIAVCAGALTMSNVAL 279
            ..||||||.:.||||.:.|.:::|.|.:.:.:|..     |::.||.||||.|.||::..:|:.:
Human   257 SAPFLILAFLALLDGALQLCILQPSKVSPESAKGT-----PLFMLLKDPYILVAAGSICFANMGV 316

  Fly   280 AFLEPTISLWMEDNMTTDNWKIGMVWLPAFFPHVLGV----VITVKMARKYPQHQWLMAAGGLAL 340
            |.||||:.:||...|.:..|::|:.:|||...:::|.    |:..||.|      ||.:..|:.:
Human   317 AILEPTLPIWMMQTMCSPKWQLGLAFLPASVSYLIGTNLFGVLANKMGR------WLCSLIGMLV 375

  Fly   341 EGFSCFIIPFCSGYKMLMLPICVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIA 405
            .|.|...:|.......|:.|...:...|.::|::::|.:|:|||:|:.|||||:|||||:::.:.
Human   376 VGTSLLCVPLAHNIFGLIGPNAGLGLAIGMVDSSMMPIMGHLVDLRHTSVYGSVYAIADVAFCMG 440

  Fly   406 YAVGPIIAGGVVEAIGFTALNFLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNKEYQT 470
            :|:||...|.:|:||||..|..:....|:.|.|:...||:                 ||.||.:.
Human   441 FAIGPSTGGAIVKAIGFPWLMVITGVINIVYAPLCYYLRS-----------------PPAKEEKL 488

  Fly   471 YVMHDQKPVEGGVKNHLEYGQQYQQEQETNLDDQQYEYQQQQQGYQQGYQQDQGYQPGYQE 531
            .::....|:|                      .:.|..|:..:.:..|...|:  :|.::|
Human   489 AILSQDCPME----------------------TRMYATQKPTKEFPLGEDSDE--EPDHEE 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_SLC18A3_VAChT 35..444 CDD:340941 170/470 (36%)
SLC18A1NP_003044.1 MFS_SLC18A1_2_VAT1_2 131..479 CDD:340942 143/358 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..525 4/23 (17%)

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