DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and slc18a3a

DIOPT Version :9

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001071018.1 Gene:slc18a3a / 559347 ZFINID:ZDB-GENE-060929-990 Length:513 Species:Danio rerio


Alignment Length:488 Identity:257/488 - (52%)
Similarity:340/488 - (69%) Gaps:21/488 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLREIGSFDDGPTPPPLRDNITGKIIPVHH 88
            ||:|..|||:|||||.:|||||||||||||||:||||..:.|..:       :.::.|.......
Zfish    31 IQDPERQRRIILVIVCVALLLDNMLYMVIVPIVPDYLAHLESESE-------QAHVKGNSSINIT 88

  Fly    89 DHHGQDSATGILFASKAIVQLMVNPFSGGLIDKIGYDLPMMIGLTIMFFSTAVFACGSSYSVLFF 153
            .:...|...|:|||||||:||:|||.:|..||::|||:|::|||:|||.||.:||...:|:.||.
Zfish    89 QNENFDLQIGVLFASKAILQLLVNPLTGTFIDRVGYDIPLLIGLSIMFVSTCIFAFAENYATLFM 153

  Fly   154 ARSLQGAGSAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPF 218
            ||||||.|||||||:|:|||||::.||:|||:||||||||||||.|.||||||.||:||||..||
Zfish   154 ARSLQGLGSAFADTSGIAMIADKYAEESERSRALGIALAFISFGSLAAPPFGGVLYEFAGKRFPF 218

  Fly   219 LILALVCLLDGLMLLLVMKPVKEAMKQSKDVQDQVIPIWRLLMDPYIAVCAGALTMSNVALAFLE 283
            :.||.|||.||::.|.|:||.....:::..|.   .||::|::||||||.|||||..|:.|||||
Zfish   219 IALACVCLADGILCLTVLKPFSSRTRENMPVG---TPIYKLMIDPYIAVVAGALTTCNIPLAFLE 280

  Fly   284 PTISLWMEDNMTTDNWKIGMVWLPAFFPHVLGVVITVKMARKYPQHQWLMAAGGLALEGFSCFII 348
            |||:.|||:.|....|:||:.||||||||:|||.:|||:|.|||..||...|.|:.:.|.|..|:
Zfish   281 PTIANWMEETMNASQWQIGITWLPAFFPHILGVYLTVKLAAKYPHLQWFYGALGMVIIGASSCIV 345

  Fly   349 PFCSGYKMLMLPICVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIA 413
            |.|..::.|::|:|.:||||||:||||||||.:|||||:||||||:||||||||.:|||:|||:|
Zfish   346 PACKNFEQLIIPLCGVCFGIALVDTALLPTLAFLVDVRHVSVYGSVYAIADISYCVAYALGPIVA 410

  Fly   414 GGVVEAIGFTALNFLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNKEYQTYVMHDQKP 478
            |.:|..:||..||..:..:|:.|.|.|..|||:...||..:|.|:|:::.....|.|..|.:::.
Zfish   411 GKIVHDLGFVQLNLGMGLANVLYAPALLLLRNVSLMKPSHSERNMLLEEGATGLYDTIRMEERQR 475

  Fly   479 VEGGV----------KNHLEYGQQYQ-QEQETN 500
            .:.|.          :|....||... .|:||:
Zfish   476 KKHGYSSSGNCVPIDENGTFAGQSKSFSEEETS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_1 88..410 CDD:284993 193/321 (60%)
2_A_01_02 98..238 CDD:273318 93/139 (67%)
slc18a3aNP_001071018.1 MFS_1 96..407 CDD:284993 192/313 (61%)
2_A_01_02 98..238 CDD:273318 93/139 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..513 7/34 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581264
Domainoid 1 1.000 407 1.000 Domainoid score I674
eggNOG 1 0.900 - - E1_KOG3764
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11022
Inparanoid 1 1.050 508 1.000 Inparanoid score I1291
OMA 1 1.010 - - QHG59108
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 1 1.000 - - otm25083
orthoMCL 1 0.900 - - OOG6_107939
Panther 1 1.100 - - LDO PTHR23506
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2004
SonicParanoid 1 1.000 - - X4405
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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