DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAChT and slc18a2

DIOPT Version :10

Sequence 1:NP_477138.1 Gene:VAChT / 42795 FlyBaseID:FBgn0270928 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001243154.1 Gene:slc18a2 / 553304 ZFINID:ZDB-GENE-080514-1 Length:515 Species:Danio rerio


Alignment Length:552 Identity:193/552 - (34%)
Similarity:285/552 - (51%) Gaps:98/552 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VREVKDIVWEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYLREIGSFDD--------- 68
            :|:...:.|  ::|....|||||:||.|||||||||..|:|||||.||..:   ||         
Zfish     7 LRDFSLLTW--LREERQSRRLILLIVFIALLLDNMLLTVVVPIIPSYLYTV---DDEAAQMVKNH 66

  Fly    69 --GPTPP--------PLRDN---ITG-----------KIIPVHHDHHGQDSA------------- 96
              .|..|        .|.||   :||           .:.|.......|...             
Zfish    67 SMTPLSPSSTFQSIVSLYDNTTRVTGFSPQMSTAGPMSLAPTFVSPQNQSDCPKADDQLLNENVK 131

  Fly    97 TGILFASKAIVQLMVNPFSGGLIDKIGYDLPMMIGLTIMFFSTAVFACGSSYSVLFFARSLQGAG 161
            .|:||||||.|||:.|||.|.|.::|||.:||..|..|||.||.:||..|||::||.||||||.|
Zfish   132 VGLLFASKATVQLITNPFIGPLTNRIGYQIPMFAGFCIMFVSTIMFAFSSSYTLLFLARSLQGVG 196

  Fly   162 SAFADTAGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILALVCL 226
            |:.:..||:.|:|..:|::.||..|:||||..::.|.||.||||..:|:|.||..||||||::.:
Zfish   197 SSCSSVAGMGMLASVYTDDEERGNAIGIALGGLAMGVLVGPPFGSVMYEFVGKTAPFLILAVLAV 261

  Fly   227 LDGLMLLLVMKPVKEAMKQSKDVQDQVIPIWRLLMDPYIAVCAGALTMSNVALAFLEPTISLWME 291
            |||.:.|.|::|.|...:..|...     :..|:.||||.:.||::..:|:|:|.|||.:.:||.
Zfish   262 LDGALQLFVLQPSKVEPESQKGTS-----LITLMKDPYILIAAGSICFANMAIAMLEPALPIWMM 321

  Fly   292 DNMTTDNWKIGMVWLPAFFPHVLGVVITVKMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKM 356
            :.|....|::|:.::||...:::|..|...:|.|  ..:||.:..|:.|.|.|...:|.......
Zfish   322 ETMCPRKWQLGIAFVPASISYLIGTNIFAVLAHK--MGRWLCSLIGMLLVGISILCVPLAKDIYG 384

  Fly   357 LMLPICVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIG 421
            |::|...:.|.|.::|::::|.:|||||:|:||||||:|||||:::.:.:|:||...|.:..:||
Zfish   385 LIVPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSVYAIADVAFCMGFALGPSAGGAIARSIG 449

  Fly   422 FTALNFLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNKEYQTYVMHDQKPVEGGVKNH 486
            |..|..:|...::.:.|:...|||                .|.|:|....:|             
Zfish   450 FPWLMTIIGLVDIMFAPLCFFLRN----------------PPANEEKMAILM------------- 485

  Fly   487 LEYGQQYQQEQETNLDDQQYEYQQQQQGYQQG 518
                       ::|...:...|..|...||.|
Zfish   486 -----------DSNCSMKTRSYSTQGSSYQMG 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAChTNP_477138.1 MFS_SLC18A3_VAChT 35..444 CDD:340941 173/454 (38%)
slc18a2NP_001243154.1 MFS_SLC18A1_2_VAT1_2 26..472 CDD:340942 174/455 (38%)

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